Gene : Cagra.2614s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  2
Name:  ? Cagra.2614s0002 Secondary Identifier:  ? PAC:28899319
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2614s0002 0.5kb upstream 0.5kb upstream 2746 true Scaffold2614: 3680-6425 Capsella grandiflora
Cagra.2614s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2614: 5926-6425 Capsella grandiflora
Cagra.2614s0002 0.5kb downstream 0.5kb downstream 2746 true Scaffold2614: 3180-5925 Capsella grandiflora
Cagra.2614s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2614: 3180-3679 Capsella grandiflora
Cagra.2614s0002 1.0kb upstream 1.0kb upstream 3246 true Scaffold2614: 3680-6925 Capsella grandiflora
Cagra.2614s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2614: 5926-6925 Capsella grandiflora
Cagra.2614s0002 1.0kb downstream 1.0kb downstream 3246 true Scaffold2614: 2680-5925 Capsella grandiflora
Cagra.2614s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2614: 2680-3679 Capsella grandiflora
Cagra.2614s0002 2.0kb upstream 2.0kb upstream 4246 true Scaffold2614: 3680-7925 Capsella grandiflora
Cagra.2614s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2614: 5926-7925 Capsella grandiflora
Cagra.2614s0002 2.0kb downstream 2.0kb downstream 4246 true Scaffold2614: 1680-5925 Capsella grandiflora
Cagra.2614s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2614: 1680-3679 Capsella grandiflora
Cagra.2614s0002 5.0kb upstream 5.0kb upstream 7246 true Scaffold2614: 3680-10925 Capsella grandiflora
Cagra.2614s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2614: 5926-10925 Capsella grandiflora
Cagra.2614s0002 5.0kb downstream 5.0kb downstream 5925 true Scaffold2614: 1-5925 Capsella grandiflora
Cagra.2614s0002 5.0kb downstream 5.0kb downstream 3679 false Scaffold2614: 1-3679 Capsella grandiflora
Cagra.2614s0002 10.0kb upstream 10.0kb upstream 12140 true Scaffold2614: 3680-15819 Capsella grandiflora
Cagra.2614s0002 10.0kb upstream 10.0kb upstream 9894 false Scaffold2614: 5926-15819 Capsella grandiflora
Cagra.2614s0002 10.0kb downstream 10.0kb downstream 5925 true Scaffold2614: 1-5925 Capsella grandiflora
Cagra.2614s0002 10.0kb downstream 10.0kb downstream 3679 false Scaffold2614: 1-3679 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371419 5261 Brassicaceae View MSA
123838508 5264 Brassicales-Malvales View MSA
124349083 5266 SBM View MSA
124251973 5268 Malvidae View MSA
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain