Gene : Cagra.2495s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10336:SF101 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 Genomic Order:  7
Name:  ? Cagra.2495s0007 Secondary Identifier:  ? PAC:28895911
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPASYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6367 Capsella grandiflora pathologic  
Cgrandiflora PWY-7039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2495s0007 0.5kb upstream 0.5kb upstream 3081 true Scaffold2495: 29741-32821 Capsella grandiflora
Cagra.2495s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2495: 32322-32821 Capsella grandiflora
Cagra.2495s0007 0.5kb downstream 0.5kb downstream 3081 true Scaffold2495: 29241-32321 Capsella grandiflora
Cagra.2495s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2495: 29241-29740 Capsella grandiflora
Cagra.2495s0007 1.0kb upstream 1.0kb upstream 3581 true Scaffold2495: 29741-33321 Capsella grandiflora
Cagra.2495s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2495: 32322-33321 Capsella grandiflora
Cagra.2495s0007 1.0kb downstream 1.0kb downstream 3581 true Scaffold2495: 28741-32321 Capsella grandiflora
Cagra.2495s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2495: 28741-29740 Capsella grandiflora
Cagra.2495s0007 2.0kb upstream 2.0kb upstream 4581 true Scaffold2495: 29741-34321 Capsella grandiflora
Cagra.2495s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2495: 32322-34321 Capsella grandiflora
Cagra.2495s0007 2.0kb downstream 2.0kb downstream 4581 true Scaffold2495: 27741-32321 Capsella grandiflora
Cagra.2495s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2495: 27741-29740 Capsella grandiflora
Cagra.2495s0007 5.0kb upstream 5.0kb upstream 7581 true Scaffold2495: 29741-37321 Capsella grandiflora
Cagra.2495s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2495: 32322-37321 Capsella grandiflora
Cagra.2495s0007 5.0kb downstream 5.0kb downstream 7581 true Scaffold2495: 24741-32321 Capsella grandiflora
Cagra.2495s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2495: 24741-29740 Capsella grandiflora
Cagra.2495s0007 10.0kb upstream 10.0kb upstream 12581 true Scaffold2495: 29741-42321 Capsella grandiflora
Cagra.2495s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2495: 32322-42321 Capsella grandiflora
Cagra.2495s0007 10.0kb downstream 10.0kb downstream 12581 true Scaffold2495: 19741-32321 Capsella grandiflora
Cagra.2495s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2495: 19741-29740 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367041 5261 Brassicaceae View MSA
123839381 5264 Brassicales-Malvales View MSA
124344734 5266 SBM View MSA
124240113 5268 Malvidae View MSA
124071120 5270 Rosid View MSA
123747360 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain