Gene : Cagra.3373s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21649:SF13 - LHCA2 PROTEIN Genomic Order:  5
Name:  ? Cagra.3373s0005 Secondary Identifier:  ? PAC:28894217
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0005 0.5kb upstream 0.5kb upstream 2053 true Scaffold3373: 17049-19101 Capsella grandiflora
Cagra.3373s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 18602-19101 Capsella grandiflora
Cagra.3373s0005 0.5kb downstream 0.5kb downstream 2053 true Scaffold3373: 16549-18601 Capsella grandiflora
Cagra.3373s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 16549-17048 Capsella grandiflora
Cagra.3373s0005 1.0kb upstream 1.0kb upstream 2553 true Scaffold3373: 17049-19601 Capsella grandiflora
Cagra.3373s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 18602-19601 Capsella grandiflora
Cagra.3373s0005 1.0kb downstream 1.0kb downstream 2553 true Scaffold3373: 16049-18601 Capsella grandiflora
Cagra.3373s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 16049-17048 Capsella grandiflora
Cagra.3373s0005 2.0kb upstream 2.0kb upstream 3553 true Scaffold3373: 17049-20601 Capsella grandiflora
Cagra.3373s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 18602-20601 Capsella grandiflora
Cagra.3373s0005 2.0kb downstream 2.0kb downstream 3553 true Scaffold3373: 15049-18601 Capsella grandiflora
Cagra.3373s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 15049-17048 Capsella grandiflora
Cagra.3373s0005 5.0kb upstream 5.0kb upstream 6553 true Scaffold3373: 17049-23601 Capsella grandiflora
Cagra.3373s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 18602-23601 Capsella grandiflora
Cagra.3373s0005 5.0kb downstream 5.0kb downstream 6553 true Scaffold3373: 12049-18601 Capsella grandiflora
Cagra.3373s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 12049-17048 Capsella grandiflora
Cagra.3373s0005 10.0kb upstream 10.0kb upstream 11553 true Scaffold3373: 17049-28601 Capsella grandiflora
Cagra.3373s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 18602-28601 Capsella grandiflora
Cagra.3373s0005 10.0kb downstream 10.0kb downstream 11553 true Scaffold3373: 7049-18601 Capsella grandiflora
Cagra.3373s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 7049-17048 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368776 5261 Brassicaceae View MSA
123840069 5264 Brassicales-Malvales View MSA
124341873 5266 SBM View MSA
124241980 5268 Malvidae View MSA
124065144 5270 Rosid View MSA
123742469 5271 Pentapetalae View MSA
122790167 5272 Eudicot View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain