Gene : Cagra.3373s0016 C. grandiflora v1.1
Defline:  (1 of 4) PTHR21726:SF30 - PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  16
Name:  ? Cagra.3373s0016 Secondary Identifier:  ? PAC:28894178
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0016 0.5kb upstream 0.5kb upstream 3774 true Scaffold3373: 55675-59448 Capsella grandiflora
Cagra.3373s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 55675-56174 Capsella grandiflora
Cagra.3373s0016 0.5kb downstream 0.5kb downstream 3774 true Scaffold3373: 56175-59948 Capsella grandiflora
Cagra.3373s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 59449-59948 Capsella grandiflora
Cagra.3373s0016 1.0kb upstream 1.0kb upstream 4274 true Scaffold3373: 55175-59448 Capsella grandiflora
Cagra.3373s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 55175-56174 Capsella grandiflora
Cagra.3373s0016 1.0kb downstream 1.0kb downstream 4274 true Scaffold3373: 56175-60448 Capsella grandiflora
Cagra.3373s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 59449-60448 Capsella grandiflora
Cagra.3373s0016 2.0kb upstream 2.0kb upstream 5274 true Scaffold3373: 54175-59448 Capsella grandiflora
Cagra.3373s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 54175-56174 Capsella grandiflora
Cagra.3373s0016 2.0kb downstream 2.0kb downstream 5274 true Scaffold3373: 56175-61448 Capsella grandiflora
Cagra.3373s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 59449-61448 Capsella grandiflora
Cagra.3373s0016 5.0kb upstream 5.0kb upstream 8274 true Scaffold3373: 51175-59448 Capsella grandiflora
Cagra.3373s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 51175-56174 Capsella grandiflora
Cagra.3373s0016 5.0kb downstream 5.0kb downstream 8274 true Scaffold3373: 56175-64448 Capsella grandiflora
Cagra.3373s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 59449-64448 Capsella grandiflora
Cagra.3373s0016 10.0kb upstream 10.0kb upstream 13274 true Scaffold3373: 46175-59448 Capsella grandiflora
Cagra.3373s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 46175-56174 Capsella grandiflora
Cagra.3373s0016 10.0kb downstream 10.0kb downstream 13274 true Scaffold3373: 56175-69448 Capsella grandiflora
Cagra.3373s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 59449-69448 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378819 5261 Brassicaceae View MSA
123802003 5264 Brassicales-Malvales View MSA
124299234 5266 SBM View MSA
124150703 5268 Malvidae View MSA
123876271 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain