Gene : Cagra.3392s0001 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31003:SF4 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K13N2-RELATED Genomic Order:  1
Name:  ? Cagra.3392s0001 Secondary Identifier:  ? PAC:28897988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3392s0001 0.5kb upstream 0.5kb upstream 2220 true Scaffold3392: 2204-4423 Capsella grandiflora
Cagra.3392s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3392: 3924-4423 Capsella grandiflora
Cagra.3392s0001 0.5kb downstream 0.5kb downstream 2220 true Scaffold3392: 1704-3923 Capsella grandiflora
Cagra.3392s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3392: 1704-2203 Capsella grandiflora
Cagra.3392s0001 1.0kb upstream 1.0kb upstream 2720 true Scaffold3392: 2204-4923 Capsella grandiflora
Cagra.3392s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3392: 3924-4923 Capsella grandiflora
Cagra.3392s0001 1.0kb downstream 1.0kb downstream 2720 true Scaffold3392: 1204-3923 Capsella grandiflora
Cagra.3392s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3392: 1204-2203 Capsella grandiflora
Cagra.3392s0001 2.0kb upstream 2.0kb upstream 3720 true Scaffold3392: 2204-5923 Capsella grandiflora
Cagra.3392s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3392: 3924-5923 Capsella grandiflora
Cagra.3392s0001 2.0kb downstream 2.0kb downstream 3720 true Scaffold3392: 204-3923 Capsella grandiflora
Cagra.3392s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3392: 204-2203 Capsella grandiflora
Cagra.3392s0001 5.0kb upstream 5.0kb upstream 6720 true Scaffold3392: 2204-8923 Capsella grandiflora
Cagra.3392s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3392: 3924-8923 Capsella grandiflora
Cagra.3392s0001 5.0kb downstream 5.0kb downstream 3923 true Scaffold3392: 1-3923 Capsella grandiflora
Cagra.3392s0001 5.0kb downstream 5.0kb downstream 2203 false Scaffold3392: 1-2203 Capsella grandiflora
Cagra.3392s0001 10.0kb upstream 10.0kb upstream 11720 true Scaffold3392: 2204-13923 Capsella grandiflora
Cagra.3392s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold3392: 3924-13923 Capsella grandiflora
Cagra.3392s0001 10.0kb downstream 10.0kb downstream 3923 true Scaffold3392: 1-3923 Capsella grandiflora
Cagra.3392s0001 10.0kb downstream 10.0kb downstream 2203 false Scaffold3392: 1-2203 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363302 5261 Brassicaceae View MSA
123841127 5264 Brassicales-Malvales View MSA
124341447 5266 SBM View MSA
124250696 5268 Malvidae View MSA
124062627 5270 Rosid View MSA
123739089 5271 Pentapetalae View MSA
122790332 5272 Eudicot View MSA
122043358 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain