Gene : Cagra.3356s0066 C. grandiflora v1.1
Defline:  (1 of 5) 3.4.21.102 - C-terminal processing peptidase / Tsp protease Genomic Order:  66
Name:  ? Cagra.3356s0066 Secondary Identifier:  ? PAC:28898104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0066 0.5kb upstream 0.5kb upstream 3789 true Scaffold3356: 258171-261959 Capsella grandiflora
Cagra.3356s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 261460-261959 Capsella grandiflora
Cagra.3356s0066 0.5kb downstream 0.5kb downstream 3789 true Scaffold3356: 257671-261459 Capsella grandiflora
Cagra.3356s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 257671-258170 Capsella grandiflora
Cagra.3356s0066 1.0kb upstream 1.0kb upstream 4289 true Scaffold3356: 258171-262459 Capsella grandiflora
Cagra.3356s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 261460-262459 Capsella grandiflora
Cagra.3356s0066 1.0kb downstream 1.0kb downstream 4289 true Scaffold3356: 257171-261459 Capsella grandiflora
Cagra.3356s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 257171-258170 Capsella grandiflora
Cagra.3356s0066 2.0kb upstream 2.0kb upstream 5289 true Scaffold3356: 258171-263459 Capsella grandiflora
Cagra.3356s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 261460-263459 Capsella grandiflora
Cagra.3356s0066 2.0kb downstream 2.0kb downstream 5289 true Scaffold3356: 256171-261459 Capsella grandiflora
Cagra.3356s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 256171-258170 Capsella grandiflora
Cagra.3356s0066 5.0kb upstream 5.0kb upstream 8289 true Scaffold3356: 258171-266459 Capsella grandiflora
Cagra.3356s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 261460-266459 Capsella grandiflora
Cagra.3356s0066 5.0kb downstream 5.0kb downstream 8289 true Scaffold3356: 253171-261459 Capsella grandiflora
Cagra.3356s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 253171-258170 Capsella grandiflora
Cagra.3356s0066 10.0kb upstream 10.0kb upstream 13289 true Scaffold3356: 258171-271459 Capsella grandiflora
Cagra.3356s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 261460-271459 Capsella grandiflora
Cagra.3356s0066 10.0kb downstream 10.0kb downstream 13289 true Scaffold3356: 248171-261459 Capsella grandiflora
Cagra.3356s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 248171-258170 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361066 5261 Brassicaceae View MSA
123834760 5264 Brassicales-Malvales View MSA
124339996 5266 SBM View MSA
124238609 5268 Malvidae View MSA
124060968 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain