Gene : Cagra.3356s0075 C. grandiflora v1.1
Defline:  (1 of 1) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase Genomic Order:  75
Name:  ? Cagra.3356s0075 Secondary Identifier:  ? PAC:28898108
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARGSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUTORN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0075 0.5kb upstream 0.5kb upstream 3187 true Scaffold3356: 305295-308481 Capsella grandiflora
Cagra.3356s0075 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 305295-305794 Capsella grandiflora
Cagra.3356s0075 0.5kb downstream 0.5kb downstream 3187 true Scaffold3356: 305795-308981 Capsella grandiflora
Cagra.3356s0075 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 308482-308981 Capsella grandiflora
Cagra.3356s0075 1.0kb upstream 1.0kb upstream 3687 true Scaffold3356: 304795-308481 Capsella grandiflora
Cagra.3356s0075 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 304795-305794 Capsella grandiflora
Cagra.3356s0075 1.0kb downstream 1.0kb downstream 3687 true Scaffold3356: 305795-309481 Capsella grandiflora
Cagra.3356s0075 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 308482-309481 Capsella grandiflora
Cagra.3356s0075 2.0kb upstream 2.0kb upstream 4687 true Scaffold3356: 303795-308481 Capsella grandiflora
Cagra.3356s0075 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 303795-305794 Capsella grandiflora
Cagra.3356s0075 2.0kb downstream 2.0kb downstream 4687 true Scaffold3356: 305795-310481 Capsella grandiflora
Cagra.3356s0075 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 308482-310481 Capsella grandiflora
Cagra.3356s0075 5.0kb upstream 5.0kb upstream 7687 true Scaffold3356: 300795-308481 Capsella grandiflora
Cagra.3356s0075 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 300795-305794 Capsella grandiflora
Cagra.3356s0075 5.0kb downstream 5.0kb downstream 7687 true Scaffold3356: 305795-313481 Capsella grandiflora
Cagra.3356s0075 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 308482-313481 Capsella grandiflora
Cagra.3356s0075 10.0kb upstream 10.0kb upstream 12687 true Scaffold3356: 295795-308481 Capsella grandiflora
Cagra.3356s0075 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 295795-305794 Capsella grandiflora
Cagra.3356s0075 10.0kb downstream 10.0kb downstream 12687 true Scaffold3356: 305795-318481 Capsella grandiflora
Cagra.3356s0075 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 308482-318481 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375657 5261 Brassicaceae View MSA
123831336 5264 Brassicales-Malvales View MSA
124343627 5266 SBM View MSA
124240366 5268 Malvidae View MSA
124065214 5270 Rosid View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain