Gene : Cagra.3356s0092 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31989:SF51 - F5D14.30 PROTEIN-RELATED Genomic Order:  92
Name:  ? Cagra.3356s0092 Secondary Identifier:  ? PAC:28898140
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0092 0.5kb upstream 0.5kb upstream 1386 true Scaffold3356: 372848-374233 Capsella grandiflora
Cagra.3356s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 373734-374233 Capsella grandiflora
Cagra.3356s0092 0.5kb downstream 0.5kb downstream 1386 true Scaffold3356: 372348-373733 Capsella grandiflora
Cagra.3356s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 372348-372847 Capsella grandiflora
Cagra.3356s0092 1.0kb upstream 1.0kb upstream 1886 true Scaffold3356: 372848-374733 Capsella grandiflora
Cagra.3356s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 373734-374733 Capsella grandiflora
Cagra.3356s0092 1.0kb downstream 1.0kb downstream 1886 true Scaffold3356: 371848-373733 Capsella grandiflora
Cagra.3356s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 371848-372847 Capsella grandiflora
Cagra.3356s0092 2.0kb upstream 2.0kb upstream 2886 true Scaffold3356: 372848-375733 Capsella grandiflora
Cagra.3356s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 373734-375733 Capsella grandiflora
Cagra.3356s0092 2.0kb downstream 2.0kb downstream 2886 true Scaffold3356: 370848-373733 Capsella grandiflora
Cagra.3356s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 370848-372847 Capsella grandiflora
Cagra.3356s0092 5.0kb upstream 5.0kb upstream 5886 true Scaffold3356: 372848-378733 Capsella grandiflora
Cagra.3356s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 373734-378733 Capsella grandiflora
Cagra.3356s0092 5.0kb downstream 5.0kb downstream 5886 true Scaffold3356: 367848-373733 Capsella grandiflora
Cagra.3356s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 367848-372847 Capsella grandiflora
Cagra.3356s0092 10.0kb upstream 10.0kb upstream 10886 true Scaffold3356: 372848-383733 Capsella grandiflora
Cagra.3356s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 373734-383733 Capsella grandiflora
Cagra.3356s0092 10.0kb downstream 10.0kb downstream 10886 true Scaffold3356: 362848-373733 Capsella grandiflora
Cagra.3356s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 362848-372847 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333531 5261 Brassicaceae Singleton cluster - no MSA
123842007 5264 Brassicales-Malvales View MSA
124323179 5266 SBM View MSA
124255534 5268 Malvidae View MSA
124073182 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain