Gene : Cagra.3356s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12277:SF58 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  6
Name:  ? Cagra.3356s0006 Secondary Identifier:  ? PAC:28898158
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0006 0.5kb upstream 0.5kb upstream 4210 true Scaffold3356: 35020-39229 Capsella grandiflora
Cagra.3356s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 35020-35519 Capsella grandiflora
Cagra.3356s0006 0.5kb downstream 0.5kb downstream 4210 true Scaffold3356: 35520-39729 Capsella grandiflora
Cagra.3356s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 39230-39729 Capsella grandiflora
Cagra.3356s0006 1.0kb upstream 1.0kb upstream 4710 true Scaffold3356: 34520-39229 Capsella grandiflora
Cagra.3356s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 34520-35519 Capsella grandiflora
Cagra.3356s0006 1.0kb downstream 1.0kb downstream 4710 true Scaffold3356: 35520-40229 Capsella grandiflora
Cagra.3356s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 39230-40229 Capsella grandiflora
Cagra.3356s0006 2.0kb upstream 2.0kb upstream 5710 true Scaffold3356: 33520-39229 Capsella grandiflora
Cagra.3356s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 33520-35519 Capsella grandiflora
Cagra.3356s0006 2.0kb downstream 2.0kb downstream 5710 true Scaffold3356: 35520-41229 Capsella grandiflora
Cagra.3356s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 39230-41229 Capsella grandiflora
Cagra.3356s0006 5.0kb upstream 5.0kb upstream 8710 true Scaffold3356: 30520-39229 Capsella grandiflora
Cagra.3356s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 30520-35519 Capsella grandiflora
Cagra.3356s0006 5.0kb downstream 5.0kb downstream 8710 true Scaffold3356: 35520-44229 Capsella grandiflora
Cagra.3356s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 39230-44229 Capsella grandiflora
Cagra.3356s0006 10.0kb upstream 10.0kb upstream 13710 true Scaffold3356: 25520-39229 Capsella grandiflora
Cagra.3356s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 25520-35519 Capsella grandiflora
Cagra.3356s0006 10.0kb downstream 10.0kb downstream 13710 true Scaffold3356: 35520-49229 Capsella grandiflora
Cagra.3356s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 39230-49229 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360492 5261 Brassicaceae View MSA
123828667 5264 Brassicales-Malvales View MSA
124343858 5266 SBM View MSA
124240348 5268 Malvidae View MSA
124072457 5270 Rosid View MSA
123753739 5271 Pentapetalae View MSA
122791791 5272 Eudicot View MSA
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain