Gene : Cagra.3356s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24073:SF545 - RAS-RELATED PROTEIN RABB1C Genomic Order:  7
Name:  ? Cagra.3356s0008 Secondary Identifier:  ? PAC:28898127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0008 0.5kb upstream 0.5kb upstream 5055 true Scaffold3356: 39503-44557 Capsella grandiflora
Cagra.3356s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 44058-44557 Capsella grandiflora
Cagra.3356s0008 0.5kb downstream 0.5kb downstream 5055 true Scaffold3356: 39003-44057 Capsella grandiflora
Cagra.3356s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 39003-39502 Capsella grandiflora
Cagra.3356s0008 1.0kb upstream 1.0kb upstream 5555 true Scaffold3356: 39503-45057 Capsella grandiflora
Cagra.3356s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 44058-45057 Capsella grandiflora
Cagra.3356s0008 1.0kb downstream 1.0kb downstream 5555 true Scaffold3356: 38503-44057 Capsella grandiflora
Cagra.3356s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 38503-39502 Capsella grandiflora
Cagra.3356s0008 2.0kb upstream 2.0kb upstream 6555 true Scaffold3356: 39503-46057 Capsella grandiflora
Cagra.3356s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 44058-46057 Capsella grandiflora
Cagra.3356s0008 2.0kb downstream 2.0kb downstream 6555 true Scaffold3356: 37503-44057 Capsella grandiflora
Cagra.3356s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 37503-39502 Capsella grandiflora
Cagra.3356s0008 5.0kb upstream 5.0kb upstream 9555 true Scaffold3356: 39503-49057 Capsella grandiflora
Cagra.3356s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 44058-49057 Capsella grandiflora
Cagra.3356s0008 5.0kb downstream 5.0kb downstream 9555 true Scaffold3356: 34503-44057 Capsella grandiflora
Cagra.3356s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 34503-39502 Capsella grandiflora
Cagra.3356s0008 10.0kb upstream 10.0kb upstream 14555 true Scaffold3356: 39503-54057 Capsella grandiflora
Cagra.3356s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 44058-54057 Capsella grandiflora
Cagra.3356s0008 10.0kb downstream 10.0kb downstream 14555 true Scaffold3356: 29503-44057 Capsella grandiflora
Cagra.3356s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 29503-39502 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369517 5261 Brassicaceae View MSA
123833814 5264 Brassicales-Malvales View MSA
124341868 5266 SBM View MSA
124242451 5268 Malvidae View MSA
124067006 5270 Rosid View MSA
123745328 5271 Pentapetalae View MSA
122797849 5272 Eudicot View MSA
122043695 5273 Angiosperm View MSA
121349962 5274 Embryophyte View MSA
123426577 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain