Gene : Cagra.3343s0001 C. grandiflora v1.1
Defline:  (1 of 2) PF03982//PF12146 - Diacylglycerol acyltransferase (DAGAT) // Serine aminopeptidase, S33 (Hydrolase_4) Genomic Order:  1
Name:  ? Cagra.3343s0001 Secondary Identifier:  ? PAC:28904027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3343s0001 0.5kb upstream 0.5kb upstream 4445 true Scaffold3343: 1060-5504 Capsella grandiflora
Cagra.3343s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3343: 1060-1559 Capsella grandiflora
Cagra.3343s0001 0.5kb downstream 0.5kb downstream 4445 true Scaffold3343: 1560-6004 Capsella grandiflora
Cagra.3343s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3343: 5505-6004 Capsella grandiflora
Cagra.3343s0001 1.0kb upstream 1.0kb upstream 4945 true Scaffold3343: 560-5504 Capsella grandiflora
Cagra.3343s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3343: 560-1559 Capsella grandiflora
Cagra.3343s0001 1.0kb downstream 1.0kb downstream 4945 true Scaffold3343: 1560-6504 Capsella grandiflora
Cagra.3343s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3343: 5505-6504 Capsella grandiflora
Cagra.3343s0001 2.0kb upstream 2.0kb upstream 5504 true Scaffold3343: 1-5504 Capsella grandiflora
Cagra.3343s0001 2.0kb upstream 2.0kb upstream 1559 false Scaffold3343: 1-1559 Capsella grandiflora
Cagra.3343s0001 2.0kb downstream 2.0kb downstream 5945 true Scaffold3343: 1560-7504 Capsella grandiflora
Cagra.3343s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3343: 5505-7504 Capsella grandiflora
Cagra.3343s0001 5.0kb upstream 5.0kb upstream 5504 true Scaffold3343: 1-5504 Capsella grandiflora
Cagra.3343s0001 5.0kb upstream 5.0kb upstream 1559 false Scaffold3343: 1-1559 Capsella grandiflora
Cagra.3343s0001 5.0kb downstream 5.0kb downstream 8945 true Scaffold3343: 1560-10504 Capsella grandiflora
Cagra.3343s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3343: 5505-10504 Capsella grandiflora
Cagra.3343s0001 10.0kb upstream 10.0kb upstream 5504 true Scaffold3343: 1-5504 Capsella grandiflora
Cagra.3343s0001 10.0kb upstream 10.0kb upstream 1559 false Scaffold3343: 1-1559 Capsella grandiflora
Cagra.3343s0001 10.0kb downstream 10.0kb downstream 13945 true Scaffold3343: 1560-15504 Capsella grandiflora
Cagra.3343s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3343: 5505-15504 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380530 5261 Brassicaceae View MSA
123841244 5264 Brassicales-Malvales View MSA
124345197 5266 SBM View MSA
124241447 5268 Malvidae View MSA
124067934 5270 Rosid View MSA
123736438 5271 Pentapetalae View MSA
122797554 5272 Eudicot View MSA
122050475 5273 Angiosperm View MSA
121351319 5274 Embryophyte View MSA
123428333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain