Gene : Cagra.3325s0008 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11706:SF46 - METAL TRANSPORTER NRAMP2-RELATED Genomic Order:  8
Name:  ? Cagra.3325s0008 Secondary Identifier:  ? PAC:28897921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3325s0008 0.5kb upstream 0.5kb upstream 3104 true Scaffold3325: 28243-31346 Capsella grandiflora
Cagra.3325s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3325: 28243-28742 Capsella grandiflora
Cagra.3325s0008 0.5kb downstream 0.5kb downstream 3104 true Scaffold3325: 28743-31846 Capsella grandiflora
Cagra.3325s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3325: 31347-31846 Capsella grandiflora
Cagra.3325s0008 1.0kb upstream 1.0kb upstream 3604 true Scaffold3325: 27743-31346 Capsella grandiflora
Cagra.3325s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3325: 27743-28742 Capsella grandiflora
Cagra.3325s0008 1.0kb downstream 1.0kb downstream 3604 true Scaffold3325: 28743-32346 Capsella grandiflora
Cagra.3325s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3325: 31347-32346 Capsella grandiflora
Cagra.3325s0008 2.0kb upstream 2.0kb upstream 4604 true Scaffold3325: 26743-31346 Capsella grandiflora
Cagra.3325s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3325: 26743-28742 Capsella grandiflora
Cagra.3325s0008 2.0kb downstream 2.0kb downstream 4604 true Scaffold3325: 28743-33346 Capsella grandiflora
Cagra.3325s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3325: 31347-33346 Capsella grandiflora
Cagra.3325s0008 5.0kb upstream 5.0kb upstream 7604 true Scaffold3325: 23743-31346 Capsella grandiflora
Cagra.3325s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3325: 23743-28742 Capsella grandiflora
Cagra.3325s0008 5.0kb downstream 5.0kb downstream 7604 true Scaffold3325: 28743-36346 Capsella grandiflora
Cagra.3325s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3325: 31347-36346 Capsella grandiflora
Cagra.3325s0008 10.0kb upstream 10.0kb upstream 12604 true Scaffold3325: 18743-31346 Capsella grandiflora
Cagra.3325s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3325: 18743-28742 Capsella grandiflora
Cagra.3325s0008 10.0kb downstream 10.0kb downstream 12604 true Scaffold3325: 28743-41346 Capsella grandiflora
Cagra.3325s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3325: 31347-41346 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368663 5261 Brassicaceae View MSA
123832200 5264 Brassicales-Malvales View MSA
124343623 5266 SBM View MSA
124240405 5268 Malvidae View MSA
124067526 5270 Rosid View MSA
123745753 5271 Pentapetalae View MSA
122790542 5272 Eudicot View MSA
122045270 5273 Angiosperm View MSA
121347104 5274 Embryophyte View MSA
123426907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain