Gene : Cagra.3346s0008 C. grandiflora v1.1
Defline:  (1 of 1) PF12507 - Human Cytomegalovirus UL139 protein (HCMV_UL139) Genomic Order:  8
Name:  ? Cagra.3346s0008 Secondary Identifier:  ? PAC:28906816
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3346s0008 0.5kb upstream 0.5kb upstream 1353 true Scaffold3346: 25322-26674 Capsella grandiflora
Cagra.3346s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3346: 26175-26674 Capsella grandiflora
Cagra.3346s0008 0.5kb downstream 0.5kb downstream 1353 true Scaffold3346: 24822-26174 Capsella grandiflora
Cagra.3346s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3346: 24822-25321 Capsella grandiflora
Cagra.3346s0008 1.0kb upstream 1.0kb upstream 1853 true Scaffold3346: 25322-27174 Capsella grandiflora
Cagra.3346s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3346: 26175-27174 Capsella grandiflora
Cagra.3346s0008 1.0kb downstream 1.0kb downstream 1853 true Scaffold3346: 24322-26174 Capsella grandiflora
Cagra.3346s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3346: 24322-25321 Capsella grandiflora
Cagra.3346s0008 2.0kb upstream 2.0kb upstream 2853 true Scaffold3346: 25322-28174 Capsella grandiflora
Cagra.3346s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3346: 26175-28174 Capsella grandiflora
Cagra.3346s0008 2.0kb downstream 2.0kb downstream 2853 true Scaffold3346: 23322-26174 Capsella grandiflora
Cagra.3346s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3346: 23322-25321 Capsella grandiflora
Cagra.3346s0008 5.0kb upstream 5.0kb upstream 5853 true Scaffold3346: 25322-31174 Capsella grandiflora
Cagra.3346s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3346: 26175-31174 Capsella grandiflora
Cagra.3346s0008 5.0kb downstream 5.0kb downstream 5853 true Scaffold3346: 20322-26174 Capsella grandiflora
Cagra.3346s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3346: 20322-25321 Capsella grandiflora
Cagra.3346s0008 10.0kb upstream 10.0kb upstream 10853 true Scaffold3346: 25322-36174 Capsella grandiflora
Cagra.3346s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3346: 26175-36174 Capsella grandiflora
Cagra.3346s0008 10.0kb downstream 10.0kb downstream 10853 true Scaffold3346: 15322-26174 Capsella grandiflora
Cagra.3346s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3346: 15322-25321 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026590 5273 Angiosperm View MSA
122372433 5261 Brassicaceae View MSA
123831024 5264 Brassicales-Malvales View MSA
124345915 5266 SBM View MSA
124239383 5268 Malvidae View MSA
124065405 5270 Rosid View MSA
123747470 5271 Pentapetalae View MSA
122788742 5272 Eudicot View MSA
121296406 5274 Embryophyte View MSA
123334575 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain