Gene : Cagra.3132s0014 C. grandiflora v1.1
Defline:  (1 of 1) 6.3.5.3 - Phosphoribosylformylglycinamidine synthase / Phosphoribosylformylglycinamidine synthetase Genomic Order:  14
Name:  ? Cagra.3132s0014 Secondary Identifier:  ? PAC:28904891
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6121 Capsella grandiflora pathologic  
Cgrandiflora PWY-841 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0014 0.5kb upstream 0.5kb upstream 5326 true Scaffold3132: 45056-50381 Capsella grandiflora
Cagra.3132s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 49882-50381 Capsella grandiflora
Cagra.3132s0014 0.5kb downstream 0.5kb downstream 5326 true Scaffold3132: 44556-49881 Capsella grandiflora
Cagra.3132s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 44556-45055 Capsella grandiflora
Cagra.3132s0014 1.0kb upstream 1.0kb upstream 5826 true Scaffold3132: 45056-50881 Capsella grandiflora
Cagra.3132s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 49882-50881 Capsella grandiflora
Cagra.3132s0014 1.0kb downstream 1.0kb downstream 5826 true Scaffold3132: 44056-49881 Capsella grandiflora
Cagra.3132s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 44056-45055 Capsella grandiflora
Cagra.3132s0014 2.0kb upstream 2.0kb upstream 6826 true Scaffold3132: 45056-51881 Capsella grandiflora
Cagra.3132s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 49882-51881 Capsella grandiflora
Cagra.3132s0014 2.0kb downstream 2.0kb downstream 6826 true Scaffold3132: 43056-49881 Capsella grandiflora
Cagra.3132s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 43056-45055 Capsella grandiflora
Cagra.3132s0014 5.0kb upstream 5.0kb upstream 9826 true Scaffold3132: 45056-54881 Capsella grandiflora
Cagra.3132s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 49882-54881 Capsella grandiflora
Cagra.3132s0014 5.0kb downstream 5.0kb downstream 9826 true Scaffold3132: 40056-49881 Capsella grandiflora
Cagra.3132s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 40056-45055 Capsella grandiflora
Cagra.3132s0014 10.0kb upstream 10.0kb upstream 14826 true Scaffold3132: 45056-59881 Capsella grandiflora
Cagra.3132s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold3132: 49882-59881 Capsella grandiflora
Cagra.3132s0014 10.0kb downstream 10.0kb downstream 14826 true Scaffold3132: 35056-49881 Capsella grandiflora
Cagra.3132s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 35056-45055 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370292 5261 Brassicaceae View MSA
123832707 5264 Brassicales-Malvales View MSA
124336746 5266 SBM View MSA
124241094 5268 Malvidae View MSA
124062786 5270 Rosid View MSA
123736916 5271 Pentapetalae View MSA
122788204 5272 Eudicot View MSA
122046400 5273 Angiosperm View MSA
121347148 5274 Embryophyte View MSA
123424914 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain