Gene : Cagra.3132s0026 C. grandiflora v1.1
Defline:  (1 of 5) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  26
Name:  ? Cagra.3132s0026 Secondary Identifier:  ? PAC:28904899
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3132s0026 0.5kb upstream 0.5kb upstream 3259 true Scaffold3132: 80854-84112 Capsella grandiflora
Cagra.3132s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold3132: 83613-84112 Capsella grandiflora
Cagra.3132s0026 0.5kb downstream 0.5kb downstream 3259 true Scaffold3132: 80354-83612 Capsella grandiflora
Cagra.3132s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold3132: 80354-80853 Capsella grandiflora
Cagra.3132s0026 1.0kb upstream 1.0kb upstream 3759 true Scaffold3132: 80854-84612 Capsella grandiflora
Cagra.3132s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold3132: 83613-84612 Capsella grandiflora
Cagra.3132s0026 1.0kb downstream 1.0kb downstream 3759 true Scaffold3132: 79854-83612 Capsella grandiflora
Cagra.3132s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold3132: 79854-80853 Capsella grandiflora
Cagra.3132s0026 2.0kb upstream 2.0kb upstream 4759 true Scaffold3132: 80854-85612 Capsella grandiflora
Cagra.3132s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold3132: 83613-85612 Capsella grandiflora
Cagra.3132s0026 2.0kb downstream 2.0kb downstream 4759 true Scaffold3132: 78854-83612 Capsella grandiflora
Cagra.3132s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold3132: 78854-80853 Capsella grandiflora
Cagra.3132s0026 5.0kb upstream 5.0kb upstream 7759 true Scaffold3132: 80854-88612 Capsella grandiflora
Cagra.3132s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold3132: 83613-88612 Capsella grandiflora
Cagra.3132s0026 5.0kb downstream 5.0kb downstream 7759 true Scaffold3132: 75854-83612 Capsella grandiflora
Cagra.3132s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold3132: 75854-80853 Capsella grandiflora
Cagra.3132s0026 10.0kb upstream 10.0kb upstream 10790 true Scaffold3132: 80854-91643 Capsella grandiflora
Cagra.3132s0026 10.0kb upstream 10.0kb upstream 8031 false Scaffold3132: 83613-91643 Capsella grandiflora
Cagra.3132s0026 10.0kb downstream 10.0kb downstream 12759 true Scaffold3132: 70854-83612 Capsella grandiflora
Cagra.3132s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold3132: 70854-80853 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367974 5261 Brassicaceae View MSA
123799459 5264 Brassicales-Malvales View MSA
124296978 5266 SBM View MSA
124148987 5268 Malvidae View MSA
124064208 5270 Rosid View MSA
123738058 5271 Pentapetalae View MSA
122790887 5272 Eudicot View MSA
122046626 5273 Angiosperm View MSA
121346435 5274 Embryophyte View MSA
123380384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain