Gene : Cagra.3134s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21206 - SLD5 PROTEIN Genomic Order:  13
Name:  ? Cagra.3134s0013 Secondary Identifier:  ? PAC:28916297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3134s0013 0.5kb upstream 0.5kb upstream 1809 true Scaffold3134: 68633-70441 Capsella grandiflora
Cagra.3134s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold3134: 68633-69132 Capsella grandiflora
Cagra.3134s0013 0.5kb downstream 0.5kb downstream 1809 true Scaffold3134: 69133-70941 Capsella grandiflora
Cagra.3134s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold3134: 70442-70941 Capsella grandiflora
Cagra.3134s0013 1.0kb upstream 1.0kb upstream 2309 true Scaffold3134: 68133-70441 Capsella grandiflora
Cagra.3134s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold3134: 68133-69132 Capsella grandiflora
Cagra.3134s0013 1.0kb downstream 1.0kb downstream 2309 true Scaffold3134: 69133-71441 Capsella grandiflora
Cagra.3134s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold3134: 70442-71441 Capsella grandiflora
Cagra.3134s0013 2.0kb upstream 2.0kb upstream 3309 true Scaffold3134: 67133-70441 Capsella grandiflora
Cagra.3134s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold3134: 67133-69132 Capsella grandiflora
Cagra.3134s0013 2.0kb downstream 2.0kb downstream 3309 true Scaffold3134: 69133-72441 Capsella grandiflora
Cagra.3134s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold3134: 70442-72441 Capsella grandiflora
Cagra.3134s0013 5.0kb upstream 5.0kb upstream 6309 true Scaffold3134: 64133-70441 Capsella grandiflora
Cagra.3134s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold3134: 64133-69132 Capsella grandiflora
Cagra.3134s0013 5.0kb downstream 5.0kb downstream 6309 true Scaffold3134: 69133-75441 Capsella grandiflora
Cagra.3134s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold3134: 70442-75441 Capsella grandiflora
Cagra.3134s0013 10.0kb upstream 10.0kb upstream 11309 true Scaffold3134: 59133-70441 Capsella grandiflora
Cagra.3134s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold3134: 59133-69132 Capsella grandiflora
Cagra.3134s0013 10.0kb downstream 10.0kb downstream 11309 true Scaffold3134: 69133-80441 Capsella grandiflora
Cagra.3134s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold3134: 70442-80441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333493 5261 Brassicaceae Singleton cluster - no MSA
123837689 5264 Brassicales-Malvales View MSA
124342914 5266 SBM View MSA
124241639 5268 Malvidae View MSA
124063241 5270 Rosid View MSA
123739150 5271 Pentapetalae View MSA
122785984 5272 Eudicot View MSA
122043096 5273 Angiosperm View MSA
121344568 5274 Embryophyte View MSA
123424652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain