Gene : Cagra.3217s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32285:SF47 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 43 Genomic Order:  15
Name:  ? Cagra.3217s0015 Secondary Identifier:  ? PAC:28908324
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3217s0015 0.5kb upstream 0.5kb upstream 1656 true Scaffold3217: 61647-63302 Capsella grandiflora
Cagra.3217s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold3217: 62803-63302 Capsella grandiflora
Cagra.3217s0015 0.5kb downstream 0.5kb downstream 1656 true Scaffold3217: 61147-62802 Capsella grandiflora
Cagra.3217s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold3217: 61147-61646 Capsella grandiflora
Cagra.3217s0015 1.0kb upstream 1.0kb upstream 2156 true Scaffold3217: 61647-63802 Capsella grandiflora
Cagra.3217s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold3217: 62803-63802 Capsella grandiflora
Cagra.3217s0015 1.0kb downstream 1.0kb downstream 2156 true Scaffold3217: 60647-62802 Capsella grandiflora
Cagra.3217s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold3217: 60647-61646 Capsella grandiflora
Cagra.3217s0015 2.0kb upstream 2.0kb upstream 3156 true Scaffold3217: 61647-64802 Capsella grandiflora
Cagra.3217s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold3217: 62803-64802 Capsella grandiflora
Cagra.3217s0015 2.0kb downstream 2.0kb downstream 3156 true Scaffold3217: 59647-62802 Capsella grandiflora
Cagra.3217s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold3217: 59647-61646 Capsella grandiflora
Cagra.3217s0015 5.0kb upstream 5.0kb upstream 6156 true Scaffold3217: 61647-67802 Capsella grandiflora
Cagra.3217s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold3217: 62803-67802 Capsella grandiflora
Cagra.3217s0015 5.0kb downstream 5.0kb downstream 6156 true Scaffold3217: 56647-62802 Capsella grandiflora
Cagra.3217s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold3217: 56647-61646 Capsella grandiflora
Cagra.3217s0015 10.0kb upstream 10.0kb upstream 11156 true Scaffold3217: 61647-72802 Capsella grandiflora
Cagra.3217s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold3217: 62803-72802 Capsella grandiflora
Cagra.3217s0015 10.0kb downstream 10.0kb downstream 11156 true Scaffold3217: 51647-62802 Capsella grandiflora
Cagra.3217s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold3217: 51647-61646 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333509 5261 Brassicaceae Singleton cluster - no MSA
123774445 5264 Brassicales-Malvales Singleton cluster - no MSA
124272881 5266 SBM Singleton cluster - no MSA
124250891 5268 Malvidae View MSA
124074370 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain