Gene : Cagra.3258s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED Genomic Order:  4
Name:  ? Cagra.3258s0004 Secondary Identifier:  ? PAC:28898058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3258s0004 0.5kb upstream 0.5kb upstream 3655 true Scaffold3258: 17320-20974 Capsella grandiflora
Cagra.3258s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3258: 17320-17819 Capsella grandiflora
Cagra.3258s0004 0.5kb downstream 0.5kb downstream 3639 true Scaffold3258: 17820-21458 Capsella grandiflora
Cagra.3258s0004 0.5kb downstream 0.5kb downstream 484 false Scaffold3258: 20975-21458 Capsella grandiflora
Cagra.3258s0004 1.0kb upstream 1.0kb upstream 4155 true Scaffold3258: 16820-20974 Capsella grandiflora
Cagra.3258s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3258: 16820-17819 Capsella grandiflora
Cagra.3258s0004 1.0kb downstream 1.0kb downstream 3639 true Scaffold3258: 17820-21458 Capsella grandiflora
Cagra.3258s0004 1.0kb downstream 1.0kb downstream 484 false Scaffold3258: 20975-21458 Capsella grandiflora
Cagra.3258s0004 2.0kb upstream 2.0kb upstream 5155 true Scaffold3258: 15820-20974 Capsella grandiflora
Cagra.3258s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3258: 15820-17819 Capsella grandiflora
Cagra.3258s0004 2.0kb downstream 2.0kb downstream 3639 true Scaffold3258: 17820-21458 Capsella grandiflora
Cagra.3258s0004 2.0kb downstream 2.0kb downstream 484 false Scaffold3258: 20975-21458 Capsella grandiflora
Cagra.3258s0004 5.0kb upstream 5.0kb upstream 8155 true Scaffold3258: 12820-20974 Capsella grandiflora
Cagra.3258s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3258: 12820-17819 Capsella grandiflora
Cagra.3258s0004 5.0kb downstream 5.0kb downstream 3639 true Scaffold3258: 17820-21458 Capsella grandiflora
Cagra.3258s0004 5.0kb downstream 5.0kb downstream 484 false Scaffold3258: 20975-21458 Capsella grandiflora
Cagra.3258s0004 10.0kb upstream 10.0kb upstream 13155 true Scaffold3258: 7820-20974 Capsella grandiflora
Cagra.3258s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3258: 7820-17819 Capsella grandiflora
Cagra.3258s0004 10.0kb downstream 10.0kb downstream 3639 true Scaffold3258: 17820-21458 Capsella grandiflora
Cagra.3258s0004 10.0kb downstream 10.0kb downstream 484 false Scaffold3258: 20975-21458 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333510 5261 Brassicaceae Singleton cluster - no MSA
123774446 5264 Brassicales-Malvales Singleton cluster - no MSA
124272882 5266 SBM Singleton cluster - no MSA
124250010 5268 Malvidae View MSA
124065298 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain