Protein Family : Helicase protein with RING/U-box domain 124065298

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  26

26 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29603.t000021 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) R. communis v0.1 6187   29603: 129545-135731
Cucsa.255160 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED C. sativus v1.0 7147   scaffold02229: 3269878-3277024
AT5G43530 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) A. thaliana TAIR10 5504   Chr5: 17489327-17494830
Lus10041156.g (1 of 1) PF00097//PF00271//PF04851//PF08797 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // HIRAN domain (HIRAN) L. usitatissimum v1.0 5046   scaffold280: 1215362-1220407
Gorai.006G248800 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED G. raimondii v2.1 5389   Chr06: 49317977-49323365
Thecc1EG020832 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) T. cacao v1.1 7547   scaffold_4: 30477906-30485452
Araha.13197s0002 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED A. halleri v1.1 4662   Scaffold13197: 3070-7731
Cagra.3258s0004 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED C. grandiflora v1.1 3155   Scaffold3258: 17820-20974
Glyma.20G087900 (1 of 4) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED G. max Wm82.a2.v1 6200   Chr20: 32877870-32884069
Brara.F03801 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED B. rapa FPsc v1.3 4970   A06: 28681655-28686624
Bostr.3148s0116 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED B. stricta v1.2 5614   Scaffold3148: 815520-821133
Medtr1g044120 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED M. truncatula Mt4.0v1 6486   chr1: 16509136-16515621
Eucgr.H03138 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED E. grandis v2.0 7865   Chr08: 44528350-44536214
Prupe.1G034800 (1 of 3) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED P. persica v2.1 6643   Pp01: 2436594-2443236
Manes.15G038300 (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED M. esculenta v6.1 6400   Chromosome15: 2892816-2899215
AL8G16770 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) A. lyrata v2.1 5785   scaffold_8: 4222900-4228684
Tp57577_TGAC_v2_gene15881 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) T. pratense v2 7019   Tp57577_TGAC_v2_scaf_249: 185507-192525
Phvul.007G272200 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) P. vulgaris v2.1 6344   Chr07: 39352051-39358394
Potri.003G083400 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) P. trichocarpa v3.1 6225   Chr03: 11088941-11095165
Podel.03G087000 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) P. deltoides WV94 v2.1 6224   Chr03: 10672266-10678489
VIT_205s0049g00150 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) V. vinifera v2.1 6247   chr5: 7209922-7216168
Carub.0008s0509 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) C. rubella v1.1 5518   scaffold_8: 2222296-2227813
MD16G1213200 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) M. domestica v1.1 6335   Chr16: 20495126-20501460
Ca_23176 (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) C. arietinum v1.0 5451   Ca4: 28080701-28086151
gene01770-v1.0-hybrid (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) F. vesca v2.0.a2 6809   Fvb4: 2893161-2899969
gene01766-v1.0-hybrid (1 of 1) PF00176//PF00271//PF08797 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) // HIRAN domain (HIRAN) F. vesca v2.0.a2 7463   Fvb4: 2872813-2880275

26 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.255160.1 C. sativus v1.0 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Lus10041156 L. usitatissimum v1.0 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Gorai.006G248800.1 G. raimondii v2.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Araha.13197s0002.1.p A. halleri v1.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Cagra.3258s0004.1.p C. grandiflora v1.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Glyma.20G087900.1.p G. max Wm82.a2.v1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Brara.F03801.1.p B. rapa FPsc v1.3 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Medtr1g044120.1 M. truncatula Mt4.0v1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Manes.15G038300.1.p M. esculenta v6.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
AL8G16770.t1 A. lyrata v2.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Podel.03G087000.1.p P. deltoides WV94 v2.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
MD16G1213200 M. domestica v1.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
gene01766-v1.0-hybrid.t1 F. vesca v2.0.a2 124065298 Helicase protein with RING/U-box domain 2 5270 Rosid
gene01770-v1.0-hybrid.t1 F. vesca v2.0.a2 124065298 Helicase protein with RING/U-box domain 2 5270 Rosid
29603.m000529 R. communis v0.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
AT5G43530.1 A. thaliana TAIR10 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Thecc1EG020832t1 T. cacao v1.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Bostr.3148s0116.1.p B. stricta v1.2 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Eucgr.H03138.1.p E. grandis v2.0 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Prupe.1G034800.1.p P. persica v2.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Tp57577_TGAC_v2_mRNA16422 T. pratense v2 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Phvul.007G272200.2.p P. vulgaris v2.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Potri.003G083400.1.p P. trichocarpa v3.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
VIT_205s0049g00150.1 V. vinifera v2.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Carub.0008s0509.1.p C. rubella v1.1 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid
Ca_23176 C. arietinum v1.0 124065298 Helicase protein with RING/U-box domain 1 5270 Rosid