Gene : Glyma.20G087900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED Genomic Order:  879
Name:  ? Glyma.20G087900 Secondary Identifier:  ? PAC:30520171
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G087900 0.5kb upstream 0.5kb upstream 6700 true Chr20: 32877870-32884569 Glycine max
Glyma.20G087900 0.5kb upstream 0.5kb upstream 500 false Chr20: 32884070-32884569 Glycine max
Glyma.20G087900 0.5kb downstream 0.5kb downstream 6700 true Chr20: 32877370-32884069 Glycine max
Glyma.20G087900 0.5kb downstream 0.5kb downstream 500 false Chr20: 32877370-32877869 Glycine max
Glyma.20G087900 1.0kb upstream 1.0kb upstream 7200 true Chr20: 32877870-32885069 Glycine max
Glyma.20G087900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 32884070-32885069 Glycine max
Glyma.20G087900 1.0kb downstream 1.0kb downstream 7200 true Chr20: 32876870-32884069 Glycine max
Glyma.20G087900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 32876870-32877869 Glycine max
Glyma.20G087900 2.0kb upstream 2.0kb upstream 8200 true Chr20: 32877870-32886069 Glycine max
Glyma.20G087900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 32884070-32886069 Glycine max
Glyma.20G087900 2.0kb downstream 2.0kb downstream 8200 true Chr20: 32875870-32884069 Glycine max
Glyma.20G087900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 32875870-32877869 Glycine max
Glyma.20G087900 5.0kb upstream 5.0kb upstream 11200 true Chr20: 32877870-32889069 Glycine max
Glyma.20G087900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 32884070-32889069 Glycine max
Glyma.20G087900 5.0kb downstream 5.0kb downstream 11200 true Chr20: 32872870-32884069 Glycine max
Glyma.20G087900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 32872870-32877869 Glycine max
Glyma.20G087900 10.0kb upstream 10.0kb upstream 16200 true Chr20: 32877870-32894069 Glycine max
Glyma.20G087900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 32884070-32894069 Glycine max
Glyma.20G087900 10.0kb downstream 10.0kb downstream 16200 true Chr20: 32867870-32884069 Glycine max
Glyma.20G087900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 32867870-32877869 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309890 5265 Fabidae View MSA
124065298 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0153191 0.0 0.064157 Low Low
cufflinks 2.93737 0.0 11.24   High
cufflinks 0.135471 0.0 1.19135 Low  
cufflinks 0.548127 0.0 2.19036    
cufflinks 0.913898 0.0 4.22561    
cufflinks 0.512673 0.0 2.09839    
cufflinks 0.419443 0.0 1.82323    
cufflinks 0.375526 0.0 1.62893    
cufflinks 1.16305 0.0 4.94382    
cufflinks 0.109        
cufflinks 0.093       Low
cufflinks 0.386        
cufflinks 0.557        
cufflinks 0.779       High
cufflinks 0.096       Low
cufflinks 0.191        
cufflinks 0.173        
cufflinks 0.228        
cufflinks 1.806       High
cufflinks 0.141        
cufflinks 0.259        
cufflinks 0.18        
cufflinks 0.472        
cufflinks 0.075       Low
cufflinks 0.153        
cufflinks 0.382        

0 Strain