Gene : Medtr1g044120 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED Description:  DNA repair helicase rad5,16, putative
Genomic Order:  2170 Name:  ? Medtr1g044120
Secondary Identifier:  ? PAC:31093550
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g044120 0.5kb upstream 0.5kb upstream 6986 true chr1: 16508636-16515621 Medicago truncatula
Medtr1g044120 0.5kb upstream 0.5kb upstream 500 false chr1: 16508636-16509135 Medicago truncatula
Medtr1g044120 0.5kb downstream 0.5kb downstream 6986 true chr1: 16509136-16516121 Medicago truncatula
Medtr1g044120 0.5kb downstream 0.5kb downstream 500 false chr1: 16515622-16516121 Medicago truncatula
Medtr1g044120 1.0kb upstream 1.0kb upstream 7486 true chr1: 16508136-16515621 Medicago truncatula
Medtr1g044120 1.0kb upstream 1.0kb upstream 1000 false chr1: 16508136-16509135 Medicago truncatula
Medtr1g044120 1.0kb downstream 1.0kb downstream 7486 true chr1: 16509136-16516621 Medicago truncatula
Medtr1g044120 1.0kb downstream 1.0kb downstream 1000 false chr1: 16515622-16516621 Medicago truncatula
Medtr1g044120 2.0kb upstream 2.0kb upstream 8486 true chr1: 16507136-16515621 Medicago truncatula
Medtr1g044120 2.0kb upstream 2.0kb upstream 2000 false chr1: 16507136-16509135 Medicago truncatula
Medtr1g044120 2.0kb downstream 2.0kb downstream 8486 true chr1: 16509136-16517621 Medicago truncatula
Medtr1g044120 2.0kb downstream 2.0kb downstream 2000 false chr1: 16515622-16517621 Medicago truncatula
Medtr1g044120 5.0kb upstream 5.0kb upstream 11486 true chr1: 16504136-16515621 Medicago truncatula
Medtr1g044120 5.0kb upstream 5.0kb upstream 5000 false chr1: 16504136-16509135 Medicago truncatula
Medtr1g044120 5.0kb downstream 5.0kb downstream 11486 true chr1: 16509136-16520621 Medicago truncatula
Medtr1g044120 5.0kb downstream 5.0kb downstream 5000 false chr1: 16515622-16520621 Medicago truncatula
Medtr1g044120 10.0kb upstream 10.0kb upstream 16486 true chr1: 16499136-16515621 Medicago truncatula
Medtr1g044120 10.0kb upstream 10.0kb upstream 10000 false chr1: 16499136-16509135 Medicago truncatula
Medtr1g044120 10.0kb downstream 10.0kb downstream 16486 true chr1: 16509136-16525621 Medicago truncatula
Medtr1g044120 10.0kb downstream 10.0kb downstream 10000 false chr1: 16515622-16525621 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309890 5265 Fabidae View MSA
124065298 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169        
cufflinks 0.027     Low  
cufflinks 0.021     Low  
cufflinks 0.083        
cufflinks 0.016     Low Low
cufflinks 0.056     Low  
cufflinks 0.473       High
cufflinks 0.017     Low Low
cufflinks 0.56       High

0 Strain