Gene : AT5G43530 A. thaliana TAIR10
Defline:  (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) Genomic Order:  3703
Name:  ? AT5G43530 Secondary Identifier:  ? PAC:19666838
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43530 0.5kb upstream 0.5kb upstream 6004 true Chr5: 17488827-17494830 Arabidopsis thaliana
AT5G43530 0.5kb upstream 0.5kb upstream 500 false Chr5: 17488827-17489326 Arabidopsis thaliana
AT5G43530 0.5kb downstream 0.5kb downstream 6004 true Chr5: 17489327-17495330 Arabidopsis thaliana
AT5G43530 0.5kb downstream 0.5kb downstream 500 false Chr5: 17494831-17495330 Arabidopsis thaliana
AT5G43530 1.0kb upstream 1.0kb upstream 6504 true Chr5: 17488327-17494830 Arabidopsis thaliana
AT5G43530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17488327-17489326 Arabidopsis thaliana
AT5G43530 1.0kb downstream 1.0kb downstream 6504 true Chr5: 17489327-17495830 Arabidopsis thaliana
AT5G43530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17494831-17495830 Arabidopsis thaliana
AT5G43530 2.0kb upstream 2.0kb upstream 7504 true Chr5: 17487327-17494830 Arabidopsis thaliana
AT5G43530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17487327-17489326 Arabidopsis thaliana
AT5G43530 2.0kb downstream 2.0kb downstream 7504 true Chr5: 17489327-17496830 Arabidopsis thaliana
AT5G43530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17494831-17496830 Arabidopsis thaliana
AT5G43530 5.0kb upstream 5.0kb upstream 10504 true Chr5: 17484327-17494830 Arabidopsis thaliana
AT5G43530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17484327-17489326 Arabidopsis thaliana
AT5G43530 5.0kb downstream 5.0kb downstream 10504 true Chr5: 17489327-17499830 Arabidopsis thaliana
AT5G43530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17494831-17499830 Arabidopsis thaliana
AT5G43530 10.0kb upstream 10.0kb upstream 15504 true Chr5: 17479327-17494830 Arabidopsis thaliana
AT5G43530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17479327-17489326 Arabidopsis thaliana
AT5G43530 10.0kb downstream 10.0kb downstream 15504 true Chr5: 17489327-17504830 Arabidopsis thaliana
AT5G43530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17494831-17504830 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381541 5261 Brassicaceae View MSA
123834916 5264 Brassicales-Malvales View MSA
124321978 5266 SBM View MSA
124250010 5268 Malvidae View MSA
124065298 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.065     Low  
cufflinks 0.498        
cufflinks 0.041     Low Low
cufflinks 0.342     Low  
cufflinks 0.054     Low  
cufflinks 0.612       High

0 Strain