Gene : Phvul.007G272200 P. vulgaris v2.1
Defline:  (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) Genomic Order:  2582
Name:  ? Phvul.007G272200 Secondary Identifier:  ? PAC:37165051
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G272200 0.5kb upstream 0.5kb upstream 6844 true Chr07: 39352051-39358894 Phaseolus vulgaris
Phvul.007G272200 0.5kb upstream 0.5kb upstream 500 false Chr07: 39358395-39358894 Phaseolus vulgaris
Phvul.007G272200 0.5kb downstream 0.5kb downstream 6844 true Chr07: 39351551-39358394 Phaseolus vulgaris
Phvul.007G272200 0.5kb downstream 0.5kb downstream 500 false Chr07: 39351551-39352050 Phaseolus vulgaris
Phvul.007G272200 1.0kb upstream 1.0kb upstream 7344 true Chr07: 39352051-39359394 Phaseolus vulgaris
Phvul.007G272200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39358395-39359394 Phaseolus vulgaris
Phvul.007G272200 1.0kb downstream 1.0kb downstream 7344 true Chr07: 39351051-39358394 Phaseolus vulgaris
Phvul.007G272200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39351051-39352050 Phaseolus vulgaris
Phvul.007G272200 2.0kb upstream 2.0kb upstream 8344 true Chr07: 39352051-39360394 Phaseolus vulgaris
Phvul.007G272200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39358395-39360394 Phaseolus vulgaris
Phvul.007G272200 2.0kb downstream 2.0kb downstream 8344 true Chr07: 39350051-39358394 Phaseolus vulgaris
Phvul.007G272200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39350051-39352050 Phaseolus vulgaris
Phvul.007G272200 5.0kb upstream 5.0kb upstream 11344 true Chr07: 39352051-39363394 Phaseolus vulgaris
Phvul.007G272200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39358395-39363394 Phaseolus vulgaris
Phvul.007G272200 5.0kb downstream 5.0kb downstream 11344 true Chr07: 39347051-39358394 Phaseolus vulgaris
Phvul.007G272200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39347051-39352050 Phaseolus vulgaris
Phvul.007G272200 10.0kb upstream 10.0kb upstream 16344 true Chr07: 39352051-39368394 Phaseolus vulgaris
Phvul.007G272200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39358395-39368394 Phaseolus vulgaris
Phvul.007G272200 10.0kb downstream 10.0kb downstream 16344 true Chr07: 39342051-39358394 Phaseolus vulgaris
Phvul.007G272200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39342051-39352050 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309890 5265 Fabidae View MSA
124065298 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.340251 0.0 1.4798 Low Low
cufflinks 1.55614 0.0 6.05513    
cufflinks 0.452097 0.0 1.87574 Low  
cufflinks 0.372042 0.0 2.05706 Low Low
cufflinks 1.31267 0.0 5.26176    
cufflinks 2.57906 0.0 9.94853   High
cufflinks 2.07516 0.0 7.15732    
cufflinks 2.30231 0.0 9.23562    
cufflinks 1.35843 0.0 6.1684    
cufflinks 0.195237 0.0 1.36277 Low Low
cufflinks 1.56552 0.0 5.96288    

0 Strain