Gene : Cagra.3181s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10938:SF0 - TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIAL Genomic Order:  16
Name:  ? Cagra.3181s0016 Secondary Identifier:  ? PAC:28912179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3181s0016 0.5kb upstream 0.5kb upstream 3597 true Scaffold3181: 50807-54403 Capsella grandiflora
Cagra.3181s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3181: 50807-51306 Capsella grandiflora
Cagra.3181s0016 0.5kb downstream 0.5kb downstream 3597 true Scaffold3181: 51307-54903 Capsella grandiflora
Cagra.3181s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3181: 54404-54903 Capsella grandiflora
Cagra.3181s0016 1.0kb upstream 1.0kb upstream 4097 true Scaffold3181: 50307-54403 Capsella grandiflora
Cagra.3181s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3181: 50307-51306 Capsella grandiflora
Cagra.3181s0016 1.0kb downstream 1.0kb downstream 4097 true Scaffold3181: 51307-55403 Capsella grandiflora
Cagra.3181s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3181: 54404-55403 Capsella grandiflora
Cagra.3181s0016 2.0kb upstream 2.0kb upstream 5097 true Scaffold3181: 49307-54403 Capsella grandiflora
Cagra.3181s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3181: 49307-51306 Capsella grandiflora
Cagra.3181s0016 2.0kb downstream 2.0kb downstream 5097 true Scaffold3181: 51307-56403 Capsella grandiflora
Cagra.3181s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3181: 54404-56403 Capsella grandiflora
Cagra.3181s0016 5.0kb upstream 5.0kb upstream 8097 true Scaffold3181: 46307-54403 Capsella grandiflora
Cagra.3181s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3181: 46307-51306 Capsella grandiflora
Cagra.3181s0016 5.0kb downstream 5.0kb downstream 8097 true Scaffold3181: 51307-59403 Capsella grandiflora
Cagra.3181s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3181: 54404-59403 Capsella grandiflora
Cagra.3181s0016 10.0kb upstream 10.0kb upstream 13097 true Scaffold3181: 41307-54403 Capsella grandiflora
Cagra.3181s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3181: 41307-51306 Capsella grandiflora
Cagra.3181s0016 10.0kb downstream 10.0kb downstream 13097 true Scaffold3181: 51307-64403 Capsella grandiflora
Cagra.3181s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3181: 54404-64403 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333506 5261 Brassicaceae Singleton cluster - no MSA
123774442 5264 Brassicales-Malvales Singleton cluster - no MSA
124272878 5266 SBM Singleton cluster - no MSA
124128613 5268 Malvidae Singleton cluster - no MSA
124068567 5270 Rosid View MSA
123738585 5271 Pentapetalae View MSA
122786814 5272 Eudicot View MSA
122047018 5273 Angiosperm View MSA
121346506 5274 Embryophyte View MSA
123426932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain