Gene : Cagra.3181s0020 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10744//PTHR10744:SF10 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER Genomic Order:  20
Name:  ? Cagra.3181s0020 Secondary Identifier:  ? PAC:28912181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3181s0020 0.5kb upstream 0.5kb upstream 1975 true Scaffold3181: 77155-79129 Capsella grandiflora
Cagra.3181s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3181: 78630-79129 Capsella grandiflora
Cagra.3181s0020 0.5kb downstream 0.5kb downstream 1975 true Scaffold3181: 76655-78629 Capsella grandiflora
Cagra.3181s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold3181: 76655-77154 Capsella grandiflora
Cagra.3181s0020 1.0kb upstream 1.0kb upstream 2475 true Scaffold3181: 77155-79629 Capsella grandiflora
Cagra.3181s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3181: 78630-79629 Capsella grandiflora
Cagra.3181s0020 1.0kb downstream 1.0kb downstream 2475 true Scaffold3181: 76155-78629 Capsella grandiflora
Cagra.3181s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold3181: 76155-77154 Capsella grandiflora
Cagra.3181s0020 2.0kb upstream 2.0kb upstream 3475 true Scaffold3181: 77155-80629 Capsella grandiflora
Cagra.3181s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3181: 78630-80629 Capsella grandiflora
Cagra.3181s0020 2.0kb downstream 2.0kb downstream 3475 true Scaffold3181: 75155-78629 Capsella grandiflora
Cagra.3181s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold3181: 75155-77154 Capsella grandiflora
Cagra.3181s0020 5.0kb upstream 5.0kb upstream 6475 true Scaffold3181: 77155-83629 Capsella grandiflora
Cagra.3181s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3181: 78630-83629 Capsella grandiflora
Cagra.3181s0020 5.0kb downstream 5.0kb downstream 6475 true Scaffold3181: 72155-78629 Capsella grandiflora
Cagra.3181s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold3181: 72155-77154 Capsella grandiflora
Cagra.3181s0020 10.0kb upstream 10.0kb upstream 11475 true Scaffold3181: 77155-88629 Capsella grandiflora
Cagra.3181s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold3181: 78630-88629 Capsella grandiflora
Cagra.3181s0020 10.0kb downstream 10.0kb downstream 11475 true Scaffold3181: 67155-78629 Capsella grandiflora
Cagra.3181s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold3181: 67155-77154 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344014 5261 Brassicaceae View MSA
123841535 5264 Brassicales-Malvales View MSA
124350800 5266 SBM View MSA
124254542 5268 Malvidae View MSA
124061997 5270 Rosid View MSA
123740255 5271 Pentapetalae View MSA
122794687 5272 Eudicot View MSA
122044220 5273 Angiosperm View MSA
121344694 5274 Embryophyte View MSA
123428242 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain