Gene : Cagra.3086s0004 C. grandiflora v1.1
Defline:  (1 of 4) 4.1.1.15 - Glutamate decarboxylase / L-glutamate 1-carboxy-lyase Genomic Order:  4
Name:  ? Cagra.3086s0004 Secondary Identifier:  ? PAC:28894944
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUDEG-I-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY0-1305 Capsella grandiflora pathologic  
Cgrandiflora PWY-4321 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3086s0004 0.5kb upstream 0.5kb upstream 4540 true Scaffold3086: 14722-19261 Capsella grandiflora
Cagra.3086s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3086: 14722-15221 Capsella grandiflora
Cagra.3086s0004 0.5kb downstream 0.5kb downstream 4540 true Scaffold3086: 15222-19761 Capsella grandiflora
Cagra.3086s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3086: 19262-19761 Capsella grandiflora
Cagra.3086s0004 1.0kb upstream 1.0kb upstream 5040 true Scaffold3086: 14222-19261 Capsella grandiflora
Cagra.3086s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3086: 14222-15221 Capsella grandiflora
Cagra.3086s0004 1.0kb downstream 1.0kb downstream 5040 true Scaffold3086: 15222-20261 Capsella grandiflora
Cagra.3086s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3086: 19262-20261 Capsella grandiflora
Cagra.3086s0004 2.0kb upstream 2.0kb upstream 6040 true Scaffold3086: 13222-19261 Capsella grandiflora
Cagra.3086s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3086: 13222-15221 Capsella grandiflora
Cagra.3086s0004 2.0kb downstream 2.0kb downstream 6040 true Scaffold3086: 15222-21261 Capsella grandiflora
Cagra.3086s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3086: 19262-21261 Capsella grandiflora
Cagra.3086s0004 5.0kb upstream 5.0kb upstream 9040 true Scaffold3086: 10222-19261 Capsella grandiflora
Cagra.3086s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3086: 10222-15221 Capsella grandiflora
Cagra.3086s0004 5.0kb downstream 5.0kb downstream 9040 true Scaffold3086: 15222-24261 Capsella grandiflora
Cagra.3086s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3086: 19262-24261 Capsella grandiflora
Cagra.3086s0004 10.0kb upstream 10.0kb upstream 14040 true Scaffold3086: 5222-19261 Capsella grandiflora
Cagra.3086s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3086: 5222-15221 Capsella grandiflora
Cagra.3086s0004 10.0kb downstream 10.0kb downstream 12593 true Scaffold3086: 15222-27814 Capsella grandiflora
Cagra.3086s0004 10.0kb downstream 10.0kb downstream 8553 false Scaffold3086: 19262-27814 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510626 5273 Angiosperm View MSA
122366302 5261 Brassicaceae View MSA
123799145 5264 Brassicales-Malvales View MSA
124296694 5266 SBM View MSA
124148772 5268 Malvidae View MSA
123874705 5270 Rosid View MSA
123458635 5271 Pentapetalae View MSA
122494036 5272 Eudicot View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain