Gene : Cagra.2991s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20938:SF0 - INTEGRATOR COMPLEX SUBUNIT 4-RELATED Genomic Order:  12
Name:  ? Cagra.2991s0012 Secondary Identifier:  ? PAC:28900243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0012 0.5kb upstream 0.5kb upstream 4990 true Scaffold2991: 47259-52248 Capsella grandiflora
Cagra.2991s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 51749-52248 Capsella grandiflora
Cagra.2991s0012 0.5kb downstream 0.5kb downstream 4990 true Scaffold2991: 46759-51748 Capsella grandiflora
Cagra.2991s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 46759-47258 Capsella grandiflora
Cagra.2991s0012 1.0kb upstream 1.0kb upstream 5490 true Scaffold2991: 47259-52748 Capsella grandiflora
Cagra.2991s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 51749-52748 Capsella grandiflora
Cagra.2991s0012 1.0kb downstream 1.0kb downstream 5490 true Scaffold2991: 46259-51748 Capsella grandiflora
Cagra.2991s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 46259-47258 Capsella grandiflora
Cagra.2991s0012 2.0kb upstream 2.0kb upstream 6490 true Scaffold2991: 47259-53748 Capsella grandiflora
Cagra.2991s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 51749-53748 Capsella grandiflora
Cagra.2991s0012 2.0kb downstream 2.0kb downstream 6490 true Scaffold2991: 45259-51748 Capsella grandiflora
Cagra.2991s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 45259-47258 Capsella grandiflora
Cagra.2991s0012 5.0kb upstream 5.0kb upstream 9490 true Scaffold2991: 47259-56748 Capsella grandiflora
Cagra.2991s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 51749-56748 Capsella grandiflora
Cagra.2991s0012 5.0kb downstream 5.0kb downstream 9490 true Scaffold2991: 42259-51748 Capsella grandiflora
Cagra.2991s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 42259-47258 Capsella grandiflora
Cagra.2991s0012 10.0kb upstream 10.0kb upstream 14490 true Scaffold2991: 47259-61748 Capsella grandiflora
Cagra.2991s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 51749-61748 Capsella grandiflora
Cagra.2991s0012 10.0kb downstream 10.0kb downstream 14490 true Scaffold2991: 37259-51748 Capsella grandiflora
Cagra.2991s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 37259-47258 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361182 5261 Brassicaceae View MSA
123834609 5264 Brassicales-Malvales View MSA
124339221 5266 SBM View MSA
124238026 5268 Malvidae View MSA
124063387 5270 Rosid View MSA
123745371 5271 Pentapetalae View MSA
122790922 5272 Eudicot View MSA
122048339 5273 Angiosperm View MSA
121350116 5274 Embryophyte View MSA
123381584 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain