Gene : Cagra.2991s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30053:SF3 - ELONGATION FACTOR EF-P Genomic Order:  18
Name:  ? Cagra.2991s0018 Secondary Identifier:  ? PAC:28900228
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0018 0.5kb upstream 0.5kb upstream 2159 true Scaffold2991: 67000-69158 Capsella grandiflora
Cagra.2991s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 67000-67499 Capsella grandiflora
Cagra.2991s0018 0.5kb downstream 0.5kb downstream 2159 true Scaffold2991: 67500-69658 Capsella grandiflora
Cagra.2991s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 69159-69658 Capsella grandiflora
Cagra.2991s0018 1.0kb upstream 1.0kb upstream 2659 true Scaffold2991: 66500-69158 Capsella grandiflora
Cagra.2991s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 66500-67499 Capsella grandiflora
Cagra.2991s0018 1.0kb downstream 1.0kb downstream 2659 true Scaffold2991: 67500-70158 Capsella grandiflora
Cagra.2991s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 69159-70158 Capsella grandiflora
Cagra.2991s0018 2.0kb upstream 2.0kb upstream 3659 true Scaffold2991: 65500-69158 Capsella grandiflora
Cagra.2991s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 65500-67499 Capsella grandiflora
Cagra.2991s0018 2.0kb downstream 2.0kb downstream 3659 true Scaffold2991: 67500-71158 Capsella grandiflora
Cagra.2991s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 69159-71158 Capsella grandiflora
Cagra.2991s0018 5.0kb upstream 5.0kb upstream 6659 true Scaffold2991: 62500-69158 Capsella grandiflora
Cagra.2991s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 62500-67499 Capsella grandiflora
Cagra.2991s0018 5.0kb downstream 5.0kb downstream 6659 true Scaffold2991: 67500-74158 Capsella grandiflora
Cagra.2991s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 69159-74158 Capsella grandiflora
Cagra.2991s0018 10.0kb upstream 10.0kb upstream 11659 true Scaffold2991: 57500-69158 Capsella grandiflora
Cagra.2991s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 57500-67499 Capsella grandiflora
Cagra.2991s0018 10.0kb downstream 10.0kb downstream 11659 true Scaffold2991: 67500-79158 Capsella grandiflora
Cagra.2991s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 69159-79158 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362036 5261 Brassicaceae View MSA
123838559 5264 Brassicales-Malvales View MSA
124336673 5266 SBM View MSA
124238667 5268 Malvidae View MSA
124067724 5270 Rosid View MSA
123738931 5271 Pentapetalae View MSA
122789538 5272 Eudicot View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain