Gene : Cagra.2991s0035 C. grandiflora v1.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  35
Name:  ? Cagra.2991s0035 Secondary Identifier:  ? PAC:28900218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0035 0.5kb upstream 0.5kb upstream 2967 true Scaffold2991: 118156-121122 Capsella grandiflora
Cagra.2991s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 118156-118655 Capsella grandiflora
Cagra.2991s0035 0.5kb downstream 0.5kb downstream 2967 true Scaffold2991: 118656-121622 Capsella grandiflora
Cagra.2991s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 121123-121622 Capsella grandiflora
Cagra.2991s0035 1.0kb upstream 1.0kb upstream 3467 true Scaffold2991: 117656-121122 Capsella grandiflora
Cagra.2991s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 117656-118655 Capsella grandiflora
Cagra.2991s0035 1.0kb downstream 1.0kb downstream 3467 true Scaffold2991: 118656-122122 Capsella grandiflora
Cagra.2991s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 121123-122122 Capsella grandiflora
Cagra.2991s0035 2.0kb upstream 2.0kb upstream 4467 true Scaffold2991: 116656-121122 Capsella grandiflora
Cagra.2991s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 116656-118655 Capsella grandiflora
Cagra.2991s0035 2.0kb downstream 2.0kb downstream 4467 true Scaffold2991: 118656-123122 Capsella grandiflora
Cagra.2991s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 121123-123122 Capsella grandiflora
Cagra.2991s0035 5.0kb upstream 5.0kb upstream 7467 true Scaffold2991: 113656-121122 Capsella grandiflora
Cagra.2991s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 113656-118655 Capsella grandiflora
Cagra.2991s0035 5.0kb downstream 5.0kb downstream 7467 true Scaffold2991: 118656-126122 Capsella grandiflora
Cagra.2991s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 121123-126122 Capsella grandiflora
Cagra.2991s0035 10.0kb upstream 10.0kb upstream 12467 true Scaffold2991: 108656-121122 Capsella grandiflora
Cagra.2991s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 108656-118655 Capsella grandiflora
Cagra.2991s0035 10.0kb downstream 10.0kb downstream 12467 true Scaffold2991: 118656-131122 Capsella grandiflora
Cagra.2991s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 121123-131122 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361896 5261 Brassicaceae View MSA
123838715 5264 Brassicales-Malvales View MSA
124342130 5266 SBM View MSA
124238909 5268 Malvidae View MSA
124066812 5270 Rosid View MSA
123740555 5271 Pentapetalae View MSA
122769985 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain