Gene : Cagra.3706s0020 C. grandiflora v1.1
Defline:  (1 of 12) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  20
Name:  ? Cagra.3706s0020 Secondary Identifier:  ? PAC:28901090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0020 0.5kb upstream 0.5kb upstream 1433 true Scaffold3706: 84435-85867 Capsella grandiflora
Cagra.3706s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 84435-84934 Capsella grandiflora
Cagra.3706s0020 0.5kb downstream 0.5kb downstream 1433 true Scaffold3706: 84935-86367 Capsella grandiflora
Cagra.3706s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 85868-86367 Capsella grandiflora
Cagra.3706s0020 1.0kb upstream 1.0kb upstream 1933 true Scaffold3706: 83935-85867 Capsella grandiflora
Cagra.3706s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 83935-84934 Capsella grandiflora
Cagra.3706s0020 1.0kb downstream 1.0kb downstream 1933 true Scaffold3706: 84935-86867 Capsella grandiflora
Cagra.3706s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 85868-86867 Capsella grandiflora
Cagra.3706s0020 2.0kb upstream 2.0kb upstream 2933 true Scaffold3706: 82935-85867 Capsella grandiflora
Cagra.3706s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 82935-84934 Capsella grandiflora
Cagra.3706s0020 2.0kb downstream 2.0kb downstream 2933 true Scaffold3706: 84935-87867 Capsella grandiflora
Cagra.3706s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 85868-87867 Capsella grandiflora
Cagra.3706s0020 5.0kb upstream 5.0kb upstream 5933 true Scaffold3706: 79935-85867 Capsella grandiflora
Cagra.3706s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 79935-84934 Capsella grandiflora
Cagra.3706s0020 5.0kb downstream 5.0kb downstream 5933 true Scaffold3706: 84935-90867 Capsella grandiflora
Cagra.3706s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 85868-90867 Capsella grandiflora
Cagra.3706s0020 10.0kb upstream 10.0kb upstream 10933 true Scaffold3706: 74935-85867 Capsella grandiflora
Cagra.3706s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 74935-84934 Capsella grandiflora
Cagra.3706s0020 10.0kb downstream 10.0kb downstream 10933 true Scaffold3706: 84935-95867 Capsella grandiflora
Cagra.3706s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 85868-95867 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381605 5261 Brassicaceae View MSA
123837386 5264 Brassicales-Malvales View MSA
124350178 5266 SBM View MSA
124242501 5268 Malvidae View MSA
124067258 5270 Rosid View MSA
123744509 5271 Pentapetalae View MSA
122793651 5272 Eudicot View MSA
122045124 5273 Angiosperm View MSA
121348379 5274 Embryophyte View MSA
123380837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain