Gene : Cagra.3706s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  21
Name:  ? Cagra.3706s0021 Secondary Identifier:  ? PAC:28901097
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora DETOX1-PWY-1 Capsella grandiflora pathologic  
Cgrandiflora PWY-4081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3706s0021 0.5kb upstream 0.5kb upstream 2649 true Scaffold3706: 85870-88518 Capsella grandiflora
Cagra.3706s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3706: 88019-88518 Capsella grandiflora
Cagra.3706s0021 0.5kb downstream 0.5kb downstream 2649 true Scaffold3706: 85370-88018 Capsella grandiflora
Cagra.3706s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3706: 85370-85869 Capsella grandiflora
Cagra.3706s0021 1.0kb upstream 1.0kb upstream 3149 true Scaffold3706: 85870-89018 Capsella grandiflora
Cagra.3706s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3706: 88019-89018 Capsella grandiflora
Cagra.3706s0021 1.0kb downstream 1.0kb downstream 3149 true Scaffold3706: 84870-88018 Capsella grandiflora
Cagra.3706s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3706: 84870-85869 Capsella grandiflora
Cagra.3706s0021 2.0kb upstream 2.0kb upstream 4149 true Scaffold3706: 85870-90018 Capsella grandiflora
Cagra.3706s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3706: 88019-90018 Capsella grandiflora
Cagra.3706s0021 2.0kb downstream 2.0kb downstream 4149 true Scaffold3706: 83870-88018 Capsella grandiflora
Cagra.3706s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3706: 83870-85869 Capsella grandiflora
Cagra.3706s0021 5.0kb upstream 5.0kb upstream 7149 true Scaffold3706: 85870-93018 Capsella grandiflora
Cagra.3706s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3706: 88019-93018 Capsella grandiflora
Cagra.3706s0021 5.0kb downstream 5.0kb downstream 7149 true Scaffold3706: 80870-88018 Capsella grandiflora
Cagra.3706s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold3706: 80870-85869 Capsella grandiflora
Cagra.3706s0021 10.0kb upstream 10.0kb upstream 12149 true Scaffold3706: 85870-98018 Capsella grandiflora
Cagra.3706s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3706: 88019-98018 Capsella grandiflora
Cagra.3706s0021 10.0kb downstream 10.0kb downstream 12149 true Scaffold3706: 75870-88018 Capsella grandiflora
Cagra.3706s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold3706: 75870-85869 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361167 5261 Brassicaceae View MSA
123839339 5264 Brassicales-Malvales View MSA
124341945 5266 SBM View MSA
124254095 5268 Malvidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain