Gene : Cagra.3756s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12899//PTHR12899:SF4 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL Genomic Order:  5
Name:  ? Cagra.3756s0005 Secondary Identifier:  ? PAC:28919792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3756s0005 0.5kb upstream 0.5kb upstream 1844 true Scaffold3756: 28674-30517 Capsella grandiflora
Cagra.3756s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3756: 30018-30517 Capsella grandiflora
Cagra.3756s0005 0.5kb downstream 0.5kb downstream 1844 true Scaffold3756: 28174-30017 Capsella grandiflora
Cagra.3756s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3756: 28174-28673 Capsella grandiflora
Cagra.3756s0005 1.0kb upstream 1.0kb upstream 2344 true Scaffold3756: 28674-31017 Capsella grandiflora
Cagra.3756s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3756: 30018-31017 Capsella grandiflora
Cagra.3756s0005 1.0kb downstream 1.0kb downstream 2344 true Scaffold3756: 27674-30017 Capsella grandiflora
Cagra.3756s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3756: 27674-28673 Capsella grandiflora
Cagra.3756s0005 2.0kb upstream 2.0kb upstream 3344 true Scaffold3756: 28674-32017 Capsella grandiflora
Cagra.3756s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3756: 30018-32017 Capsella grandiflora
Cagra.3756s0005 2.0kb downstream 2.0kb downstream 3344 true Scaffold3756: 26674-30017 Capsella grandiflora
Cagra.3756s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3756: 26674-28673 Capsella grandiflora
Cagra.3756s0005 5.0kb upstream 5.0kb upstream 6344 true Scaffold3756: 28674-35017 Capsella grandiflora
Cagra.3756s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3756: 30018-35017 Capsella grandiflora
Cagra.3756s0005 5.0kb downstream 5.0kb downstream 6344 true Scaffold3756: 23674-30017 Capsella grandiflora
Cagra.3756s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3756: 23674-28673 Capsella grandiflora
Cagra.3756s0005 10.0kb upstream 10.0kb upstream 11344 true Scaffold3756: 28674-40017 Capsella grandiflora
Cagra.3756s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3756: 30018-40017 Capsella grandiflora
Cagra.3756s0005 10.0kb downstream 10.0kb downstream 11344 true Scaffold3756: 18674-30017 Capsella grandiflora
Cagra.3756s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3756: 18674-28673 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361957 5261 Brassicaceae View MSA
123831232 5264 Brassicales-Malvales View MSA
124341176 5266 SBM View MSA
124243313 5268 Malvidae View MSA
124065867 5270 Rosid View MSA
123736838 5271 Pentapetalae View MSA
122788352 5272 Eudicot View MSA
122047564 5273 Angiosperm View MSA
121310762 5274 Embryophyte View MSA
123348169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain