Gene : Cagra.3545s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15351:SF3 - PROTEIN ERL-1 Genomic Order:  9
Name:  ? Cagra.3545s0009 Secondary Identifier:  ? PAC:28917292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3545s0009 0.5kb upstream 0.5kb upstream 2976 true Scaffold3545: 40687-43662 Capsella grandiflora
Cagra.3545s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3545: 40687-41186 Capsella grandiflora
Cagra.3545s0009 0.5kb downstream 0.5kb downstream 2976 true Scaffold3545: 41187-44162 Capsella grandiflora
Cagra.3545s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3545: 43663-44162 Capsella grandiflora
Cagra.3545s0009 1.0kb upstream 1.0kb upstream 3476 true Scaffold3545: 40187-43662 Capsella grandiflora
Cagra.3545s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3545: 40187-41186 Capsella grandiflora
Cagra.3545s0009 1.0kb downstream 1.0kb downstream 3476 true Scaffold3545: 41187-44662 Capsella grandiflora
Cagra.3545s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3545: 43663-44662 Capsella grandiflora
Cagra.3545s0009 2.0kb upstream 2.0kb upstream 4476 true Scaffold3545: 39187-43662 Capsella grandiflora
Cagra.3545s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3545: 39187-41186 Capsella grandiflora
Cagra.3545s0009 2.0kb downstream 2.0kb downstream 4476 true Scaffold3545: 41187-45662 Capsella grandiflora
Cagra.3545s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3545: 43663-45662 Capsella grandiflora
Cagra.3545s0009 5.0kb upstream 5.0kb upstream 7476 true Scaffold3545: 36187-43662 Capsella grandiflora
Cagra.3545s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3545: 36187-41186 Capsella grandiflora
Cagra.3545s0009 5.0kb downstream 5.0kb downstream 6177 true Scaffold3545: 41187-47363 Capsella grandiflora
Cagra.3545s0009 5.0kb downstream 5.0kb downstream 3701 false Scaffold3545: 43663-47363 Capsella grandiflora
Cagra.3545s0009 10.0kb upstream 10.0kb upstream 12476 true Scaffold3545: 31187-43662 Capsella grandiflora
Cagra.3545s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3545: 31187-41186 Capsella grandiflora
Cagra.3545s0009 10.0kb downstream 10.0kb downstream 6177 true Scaffold3545: 41187-47363 Capsella grandiflora
Cagra.3545s0009 10.0kb downstream 10.0kb downstream 3701 false Scaffold3545: 43663-47363 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371592 5261 Brassicaceae View MSA
123830053 5264 Brassicales-Malvales View MSA
124343793 5266 SBM View MSA
124248806 5268 Malvidae View MSA
124064438 5270 Rosid View MSA
123738190 5271 Pentapetalae View MSA
122791013 5272 Eudicot View MSA
122049377 5273 Angiosperm View MSA
121346622 5274 Embryophyte View MSA
123424219 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain