Gene : Cagra.3628s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31210:SF13 - STORAGE PROTEIN-RELATED Genomic Order:  13
Name:  ? Cagra.3628s0013 Secondary Identifier:  ? PAC:28900523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3628s0013 0.5kb upstream 0.5kb upstream 3231 true Scaffold3628: 75444-78674 Capsella grandiflora
Cagra.3628s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold3628: 75444-75943 Capsella grandiflora
Cagra.3628s0013 0.5kb downstream 0.5kb downstream 3231 true Scaffold3628: 75944-79174 Capsella grandiflora
Cagra.3628s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold3628: 78675-79174 Capsella grandiflora
Cagra.3628s0013 1.0kb upstream 1.0kb upstream 3731 true Scaffold3628: 74944-78674 Capsella grandiflora
Cagra.3628s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold3628: 74944-75943 Capsella grandiflora
Cagra.3628s0013 1.0kb downstream 1.0kb downstream 3731 true Scaffold3628: 75944-79674 Capsella grandiflora
Cagra.3628s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold3628: 78675-79674 Capsella grandiflora
Cagra.3628s0013 2.0kb upstream 2.0kb upstream 4731 true Scaffold3628: 73944-78674 Capsella grandiflora
Cagra.3628s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold3628: 73944-75943 Capsella grandiflora
Cagra.3628s0013 2.0kb downstream 2.0kb downstream 4731 true Scaffold3628: 75944-80674 Capsella grandiflora
Cagra.3628s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold3628: 78675-80674 Capsella grandiflora
Cagra.3628s0013 5.0kb upstream 5.0kb upstream 7731 true Scaffold3628: 70944-78674 Capsella grandiflora
Cagra.3628s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold3628: 70944-75943 Capsella grandiflora
Cagra.3628s0013 5.0kb downstream 5.0kb downstream 7731 true Scaffold3628: 75944-83674 Capsella grandiflora
Cagra.3628s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold3628: 78675-83674 Capsella grandiflora
Cagra.3628s0013 10.0kb upstream 10.0kb upstream 12731 true Scaffold3628: 65944-78674 Capsella grandiflora
Cagra.3628s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold3628: 65944-75943 Capsella grandiflora
Cagra.3628s0013 10.0kb downstream 10.0kb downstream 8178 true Scaffold3628: 75944-84121 Capsella grandiflora
Cagra.3628s0013 10.0kb downstream 10.0kb downstream 5447 false Scaffold3628: 78675-84121 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366217 5261 Brassicaceae View MSA
123839648 5264 Brassicales-Malvales View MSA
124342800 5266 SBM View MSA
124244125 5268 Malvidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain