Gene : Cagra.3641s0008 C. grandiflora v1.1
Defline:  (1 of 3) PTHR27001:SF55 - PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5-RELATED Genomic Order:  8
Name:  ? Cagra.3641s0008 Secondary Identifier:  ? PAC:28906238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3641s0008 0.5kb upstream 0.5kb upstream 3373 true Scaffold3641: 33718-37090 Capsella grandiflora
Cagra.3641s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3641: 36591-37090 Capsella grandiflora
Cagra.3641s0008 0.5kb downstream 0.5kb downstream 3373 true Scaffold3641: 33218-36590 Capsella grandiflora
Cagra.3641s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3641: 33218-33717 Capsella grandiflora
Cagra.3641s0008 1.0kb upstream 1.0kb upstream 3873 true Scaffold3641: 33718-37590 Capsella grandiflora
Cagra.3641s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3641: 36591-37590 Capsella grandiflora
Cagra.3641s0008 1.0kb downstream 1.0kb downstream 3873 true Scaffold3641: 32718-36590 Capsella grandiflora
Cagra.3641s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3641: 32718-33717 Capsella grandiflora
Cagra.3641s0008 2.0kb upstream 2.0kb upstream 4873 true Scaffold3641: 33718-38590 Capsella grandiflora
Cagra.3641s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3641: 36591-38590 Capsella grandiflora
Cagra.3641s0008 2.0kb downstream 2.0kb downstream 4873 true Scaffold3641: 31718-36590 Capsella grandiflora
Cagra.3641s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3641: 31718-33717 Capsella grandiflora
Cagra.3641s0008 5.0kb upstream 5.0kb upstream 7873 true Scaffold3641: 33718-41590 Capsella grandiflora
Cagra.3641s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3641: 36591-41590 Capsella grandiflora
Cagra.3641s0008 5.0kb downstream 5.0kb downstream 7873 true Scaffold3641: 28718-36590 Capsella grandiflora
Cagra.3641s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3641: 28718-33717 Capsella grandiflora
Cagra.3641s0008 10.0kb upstream 10.0kb upstream 12873 true Scaffold3641: 33718-46590 Capsella grandiflora
Cagra.3641s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3641: 36591-46590 Capsella grandiflora
Cagra.3641s0008 10.0kb downstream 10.0kb downstream 12873 true Scaffold3641: 23718-36590 Capsella grandiflora
Cagra.3641s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3641: 23718-33717 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364842 5261 Brassicaceae View MSA
123840172 5264 Brassicales-Malvales View MSA
124343372 5266 SBM View MSA
124253534 5268 Malvidae View MSA
124074896 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain