Gene : Cagra.3527s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 Genomic Order:  30
Name:  ? Cagra.3527s0030 Secondary Identifier:  ? PAC:28898564
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3527s0030 0.5kb upstream 0.5kb upstream 2104 true Scaffold3527: 118203-120306 Capsella grandiflora
Cagra.3527s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold3527: 118203-118702 Capsella grandiflora
Cagra.3527s0030 0.5kb downstream 0.5kb downstream 2104 true Scaffold3527: 118703-120806 Capsella grandiflora
Cagra.3527s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold3527: 120307-120806 Capsella grandiflora
Cagra.3527s0030 1.0kb upstream 1.0kb upstream 2604 true Scaffold3527: 117703-120306 Capsella grandiflora
Cagra.3527s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold3527: 117703-118702 Capsella grandiflora
Cagra.3527s0030 1.0kb downstream 1.0kb downstream 2604 true Scaffold3527: 118703-121306 Capsella grandiflora
Cagra.3527s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold3527: 120307-121306 Capsella grandiflora
Cagra.3527s0030 2.0kb upstream 2.0kb upstream 3604 true Scaffold3527: 116703-120306 Capsella grandiflora
Cagra.3527s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold3527: 116703-118702 Capsella grandiflora
Cagra.3527s0030 2.0kb downstream 2.0kb downstream 3604 true Scaffold3527: 118703-122306 Capsella grandiflora
Cagra.3527s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold3527: 120307-122306 Capsella grandiflora
Cagra.3527s0030 5.0kb upstream 5.0kb upstream 6604 true Scaffold3527: 113703-120306 Capsella grandiflora
Cagra.3527s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold3527: 113703-118702 Capsella grandiflora
Cagra.3527s0030 5.0kb downstream 5.0kb downstream 6604 true Scaffold3527: 118703-125306 Capsella grandiflora
Cagra.3527s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold3527: 120307-125306 Capsella grandiflora
Cagra.3527s0030 10.0kb upstream 10.0kb upstream 11604 true Scaffold3527: 108703-120306 Capsella grandiflora
Cagra.3527s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold3527: 108703-118702 Capsella grandiflora
Cagra.3527s0030 10.0kb downstream 10.0kb downstream 11604 true Scaffold3527: 118703-130306 Capsella grandiflora
Cagra.3527s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold3527: 120307-130306 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343366 5261 Brassicaceae View MSA
123838854 5264 Brassicales-Malvales View MSA
124345985 5266 SBM View MSA
124238226 5268 Malvidae View MSA
124060577 5270 Rosid View MSA
123741920 5271 Pentapetalae View MSA
122785920 5272 Eudicot View MSA
122042502 5273 Angiosperm View MSA
121347169 5274 Embryophyte View MSA
123426072 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain