Gene : Cagra.3527s0035 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21192 - NUCLEAR PROTEIN E3-3 Genomic Order:  35
Name:  ? Cagra.3527s0035 Secondary Identifier:  ? PAC:28898513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3527s0035 0.5kb upstream 0.5kb upstream 1788 true Scaffold3527: 139903-141690 Capsella grandiflora
Cagra.3527s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold3527: 141191-141690 Capsella grandiflora
Cagra.3527s0035 0.5kb downstream 0.5kb downstream 1788 true Scaffold3527: 139403-141190 Capsella grandiflora
Cagra.3527s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold3527: 139403-139902 Capsella grandiflora
Cagra.3527s0035 1.0kb upstream 1.0kb upstream 2288 true Scaffold3527: 139903-142190 Capsella grandiflora
Cagra.3527s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold3527: 141191-142190 Capsella grandiflora
Cagra.3527s0035 1.0kb downstream 1.0kb downstream 2288 true Scaffold3527: 138903-141190 Capsella grandiflora
Cagra.3527s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold3527: 138903-139902 Capsella grandiflora
Cagra.3527s0035 2.0kb upstream 2.0kb upstream 3288 true Scaffold3527: 139903-143190 Capsella grandiflora
Cagra.3527s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold3527: 141191-143190 Capsella grandiflora
Cagra.3527s0035 2.0kb downstream 2.0kb downstream 3288 true Scaffold3527: 137903-141190 Capsella grandiflora
Cagra.3527s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold3527: 137903-139902 Capsella grandiflora
Cagra.3527s0035 5.0kb upstream 5.0kb upstream 6288 true Scaffold3527: 139903-146190 Capsella grandiflora
Cagra.3527s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold3527: 141191-146190 Capsella grandiflora
Cagra.3527s0035 5.0kb downstream 5.0kb downstream 6288 true Scaffold3527: 134903-141190 Capsella grandiflora
Cagra.3527s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold3527: 134903-139902 Capsella grandiflora
Cagra.3527s0035 10.0kb upstream 10.0kb upstream 11288 true Scaffold3527: 139903-151190 Capsella grandiflora
Cagra.3527s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold3527: 141191-151190 Capsella grandiflora
Cagra.3527s0035 10.0kb downstream 10.0kb downstream 11288 true Scaffold3527: 129903-141190 Capsella grandiflora
Cagra.3527s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold3527: 129903-139902 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026335 5273 Angiosperm View MSA
122378471 5261 Brassicaceae View MSA
123801878 5264 Brassicales-Malvales View MSA
124349676 5266 SBM View MSA
124237624 5268 Malvidae View MSA
124064435 5270 Rosid View MSA
123737583 5271 Pentapetalae View MSA
122789794 5272 Eudicot View MSA
121344715 5274 Embryophyte View MSA
123423975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain