Gene : Cagra.3519s0021 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  21
Name:  ? Cagra.3519s0021 Secondary Identifier:  ? PAC:28893879
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3519s0021 0.5kb upstream 0.5kb upstream 2334 true Scaffold3519: 80179-82512 Capsella grandiflora
Cagra.3519s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3519: 82013-82512 Capsella grandiflora
Cagra.3519s0021 0.5kb downstream 0.5kb downstream 2334 true Scaffold3519: 79679-82012 Capsella grandiflora
Cagra.3519s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3519: 79679-80178 Capsella grandiflora
Cagra.3519s0021 1.0kb upstream 1.0kb upstream 2834 true Scaffold3519: 80179-83012 Capsella grandiflora
Cagra.3519s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3519: 82013-83012 Capsella grandiflora
Cagra.3519s0021 1.0kb downstream 1.0kb downstream 2834 true Scaffold3519: 79179-82012 Capsella grandiflora
Cagra.3519s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3519: 79179-80178 Capsella grandiflora
Cagra.3519s0021 2.0kb upstream 2.0kb upstream 3834 true Scaffold3519: 80179-84012 Capsella grandiflora
Cagra.3519s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3519: 82013-84012 Capsella grandiflora
Cagra.3519s0021 2.0kb downstream 2.0kb downstream 3834 true Scaffold3519: 78179-82012 Capsella grandiflora
Cagra.3519s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3519: 78179-80178 Capsella grandiflora
Cagra.3519s0021 5.0kb upstream 5.0kb upstream 6834 true Scaffold3519: 80179-87012 Capsella grandiflora
Cagra.3519s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3519: 82013-87012 Capsella grandiflora
Cagra.3519s0021 5.0kb downstream 5.0kb downstream 6834 true Scaffold3519: 75179-82012 Capsella grandiflora
Cagra.3519s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold3519: 75179-80178 Capsella grandiflora
Cagra.3519s0021 10.0kb upstream 10.0kb upstream 11834 true Scaffold3519: 80179-92012 Capsella grandiflora
Cagra.3519s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3519: 82013-92012 Capsella grandiflora
Cagra.3519s0021 10.0kb downstream 10.0kb downstream 11834 true Scaffold3519: 70179-82012 Capsella grandiflora
Cagra.3519s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold3519: 70179-80178 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373988 5261 Brassicaceae View MSA
123835432 5264 Brassicales-Malvales View MSA
124336812 5266 SBM View MSA
124237223 5268 Malvidae View MSA
124072029 5270 Rosid View MSA
123744765 5271 Pentapetalae View MSA
122790014 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain