Gene : Cagra.3501s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11669:SF0 - PROTEIN STICHEL-RELATED Genomic Order:  54
Name:  ? Cagra.3501s0054 Secondary Identifier:  ? PAC:28902307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0054 0.5kb upstream 0.5kb upstream 5005 true Scaffold3501: 200640-205644 Capsella grandiflora
Cagra.3501s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 200640-201139 Capsella grandiflora
Cagra.3501s0054 0.5kb downstream 0.5kb downstream 5005 true Scaffold3501: 201140-206144 Capsella grandiflora
Cagra.3501s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 205645-206144 Capsella grandiflora
Cagra.3501s0054 1.0kb upstream 1.0kb upstream 5505 true Scaffold3501: 200140-205644 Capsella grandiflora
Cagra.3501s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 200140-201139 Capsella grandiflora
Cagra.3501s0054 1.0kb downstream 1.0kb downstream 5505 true Scaffold3501: 201140-206644 Capsella grandiflora
Cagra.3501s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 205645-206644 Capsella grandiflora
Cagra.3501s0054 2.0kb upstream 2.0kb upstream 6505 true Scaffold3501: 199140-205644 Capsella grandiflora
Cagra.3501s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 199140-201139 Capsella grandiflora
Cagra.3501s0054 2.0kb downstream 2.0kb downstream 6505 true Scaffold3501: 201140-207644 Capsella grandiflora
Cagra.3501s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 205645-207644 Capsella grandiflora
Cagra.3501s0054 5.0kb upstream 5.0kb upstream 9505 true Scaffold3501: 196140-205644 Capsella grandiflora
Cagra.3501s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 196140-201139 Capsella grandiflora
Cagra.3501s0054 5.0kb downstream 5.0kb downstream 9505 true Scaffold3501: 201140-210644 Capsella grandiflora
Cagra.3501s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 205645-210644 Capsella grandiflora
Cagra.3501s0054 10.0kb upstream 10.0kb upstream 14505 true Scaffold3501: 191140-205644 Capsella grandiflora
Cagra.3501s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 191140-201139 Capsella grandiflora
Cagra.3501s0054 10.0kb downstream 10.0kb downstream 14505 true Scaffold3501: 201140-215644 Capsella grandiflora
Cagra.3501s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 205645-215644 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375864 5261 Brassicaceae View MSA
123836544 5264 Brassicales-Malvales View MSA
124345329 5266 SBM View MSA
124241247 5268 Malvidae View MSA
124067444 5270 Rosid View MSA
123746240 5271 Pentapetalae View MSA
122793497 5272 Eudicot View MSA
122045502 5273 Angiosperm View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain