Gene : Cagra.3501s0100 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  100
Name:  ? Cagra.3501s0100 Secondary Identifier:  ? PAC:28902244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0100 0.5kb upstream 0.5kb upstream 2967 true Scaffold3501: 356739-359705 Capsella grandiflora
Cagra.3501s0100 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 359206-359705 Capsella grandiflora
Cagra.3501s0100 0.5kb downstream 0.5kb downstream 2967 true Scaffold3501: 356239-359205 Capsella grandiflora
Cagra.3501s0100 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 356239-356738 Capsella grandiflora
Cagra.3501s0100 1.0kb upstream 1.0kb upstream 3467 true Scaffold3501: 356739-360205 Capsella grandiflora
Cagra.3501s0100 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 359206-360205 Capsella grandiflora
Cagra.3501s0100 1.0kb downstream 1.0kb downstream 3467 true Scaffold3501: 355739-359205 Capsella grandiflora
Cagra.3501s0100 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 355739-356738 Capsella grandiflora
Cagra.3501s0100 2.0kb upstream 2.0kb upstream 4467 true Scaffold3501: 356739-361205 Capsella grandiflora
Cagra.3501s0100 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 359206-361205 Capsella grandiflora
Cagra.3501s0100 2.0kb downstream 2.0kb downstream 4467 true Scaffold3501: 354739-359205 Capsella grandiflora
Cagra.3501s0100 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 354739-356738 Capsella grandiflora
Cagra.3501s0100 5.0kb upstream 5.0kb upstream 7467 true Scaffold3501: 356739-364205 Capsella grandiflora
Cagra.3501s0100 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 359206-364205 Capsella grandiflora
Cagra.3501s0100 5.0kb downstream 5.0kb downstream 7467 true Scaffold3501: 351739-359205 Capsella grandiflora
Cagra.3501s0100 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 351739-356738 Capsella grandiflora
Cagra.3501s0100 10.0kb upstream 10.0kb upstream 12467 true Scaffold3501: 356739-369205 Capsella grandiflora
Cagra.3501s0100 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 359206-369205 Capsella grandiflora
Cagra.3501s0100 10.0kb downstream 10.0kb downstream 12467 true Scaffold3501: 346739-359205 Capsella grandiflora
Cagra.3501s0100 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 346739-356738 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375186 5261 Brassicaceae View MSA
123829654 5264 Brassicales-Malvales View MSA
124341035 5266 SBM View MSA
124243843 5268 Malvidae View MSA
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain