Gene : Cagra.3501s0086 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 Genomic Order:  86
Name:  ? Cagra.3501s0086 Secondary Identifier:  ? PAC:28902241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0086 0.5kb upstream 0.5kb upstream 1563 true Scaffold3501: 314973-316535 Capsella grandiflora
Cagra.3501s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 314973-315472 Capsella grandiflora
Cagra.3501s0086 0.5kb downstream 0.5kb downstream 1563 true Scaffold3501: 315473-317035 Capsella grandiflora
Cagra.3501s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 316536-317035 Capsella grandiflora
Cagra.3501s0086 1.0kb upstream 1.0kb upstream 2063 true Scaffold3501: 314473-316535 Capsella grandiflora
Cagra.3501s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 314473-315472 Capsella grandiflora
Cagra.3501s0086 1.0kb downstream 1.0kb downstream 2063 true Scaffold3501: 315473-317535 Capsella grandiflora
Cagra.3501s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 316536-317535 Capsella grandiflora
Cagra.3501s0086 2.0kb upstream 2.0kb upstream 3063 true Scaffold3501: 313473-316535 Capsella grandiflora
Cagra.3501s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 313473-315472 Capsella grandiflora
Cagra.3501s0086 2.0kb downstream 2.0kb downstream 3063 true Scaffold3501: 315473-318535 Capsella grandiflora
Cagra.3501s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 316536-318535 Capsella grandiflora
Cagra.3501s0086 5.0kb upstream 5.0kb upstream 6063 true Scaffold3501: 310473-316535 Capsella grandiflora
Cagra.3501s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 310473-315472 Capsella grandiflora
Cagra.3501s0086 5.0kb downstream 5.0kb downstream 6063 true Scaffold3501: 315473-321535 Capsella grandiflora
Cagra.3501s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 316536-321535 Capsella grandiflora
Cagra.3501s0086 10.0kb upstream 10.0kb upstream 11063 true Scaffold3501: 305473-316535 Capsella grandiflora
Cagra.3501s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 305473-315472 Capsella grandiflora
Cagra.3501s0086 10.0kb downstream 10.0kb downstream 11063 true Scaffold3501: 315473-326535 Capsella grandiflora
Cagra.3501s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 316536-326535 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377129 5261 Brassicaceae View MSA
123839160 5264 Brassicales-Malvales View MSA
124340326 5266 SBM View MSA
124243979 5268 Malvidae View MSA
124050355 5270 Rosid View MSA
123746908 5271 Pentapetalae View MSA
122797470 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain