Gene : Cagra.3501s0109 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31471:SF5 - F7A19.1 PROTEIN-RELATED Genomic Order:  109
Name:  ? Cagra.3501s0109 Secondary Identifier:  ? PAC:28902378
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0109 0.5kb upstream 0.5kb upstream 2461 true Scaffold3501: 398738-401198 Capsella grandiflora
Cagra.3501s0109 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 400699-401198 Capsella grandiflora
Cagra.3501s0109 0.5kb downstream 0.5kb downstream 2461 true Scaffold3501: 398238-400698 Capsella grandiflora
Cagra.3501s0109 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 398238-398737 Capsella grandiflora
Cagra.3501s0109 1.0kb upstream 1.0kb upstream 2961 true Scaffold3501: 398738-401698 Capsella grandiflora
Cagra.3501s0109 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 400699-401698 Capsella grandiflora
Cagra.3501s0109 1.0kb downstream 1.0kb downstream 2961 true Scaffold3501: 397738-400698 Capsella grandiflora
Cagra.3501s0109 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 397738-398737 Capsella grandiflora
Cagra.3501s0109 2.0kb upstream 2.0kb upstream 3961 true Scaffold3501: 398738-402698 Capsella grandiflora
Cagra.3501s0109 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 400699-402698 Capsella grandiflora
Cagra.3501s0109 2.0kb downstream 2.0kb downstream 3961 true Scaffold3501: 396738-400698 Capsella grandiflora
Cagra.3501s0109 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 396738-398737 Capsella grandiflora
Cagra.3501s0109 5.0kb upstream 5.0kb upstream 6961 true Scaffold3501: 398738-405698 Capsella grandiflora
Cagra.3501s0109 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 400699-405698 Capsella grandiflora
Cagra.3501s0109 5.0kb downstream 5.0kb downstream 6961 true Scaffold3501: 393738-400698 Capsella grandiflora
Cagra.3501s0109 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 393738-398737 Capsella grandiflora
Cagra.3501s0109 10.0kb upstream 10.0kb upstream 11961 true Scaffold3501: 398738-410698 Capsella grandiflora
Cagra.3501s0109 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 400699-410698 Capsella grandiflora
Cagra.3501s0109 10.0kb downstream 10.0kb downstream 11961 true Scaffold3501: 388738-400698 Capsella grandiflora
Cagra.3501s0109 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 388738-398737 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362696 5261 Brassicaceae View MSA
123840339 5264 Brassicales-Malvales View MSA
124341924 5266 SBM View MSA
124238094 5268 Malvidae View MSA
124067331 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain