Gene : Cagra.3467s0057 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10438:SF227 - THIOREDOXIN-LIKE 2-1, CHLOROPLASTIC-RELATED Genomic Order:  57
Name:  ? Cagra.3467s0057 Secondary Identifier:  ? PAC:28912083
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3467s0057 0.5kb upstream 0.5kb upstream 2170 true Scaffold3467: 182883-185052 Capsella grandiflora
Cagra.3467s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold3467: 182883-183382 Capsella grandiflora
Cagra.3467s0057 0.5kb downstream 0.5kb downstream 2170 true Scaffold3467: 183383-185552 Capsella grandiflora
Cagra.3467s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold3467: 185053-185552 Capsella grandiflora
Cagra.3467s0057 1.0kb upstream 1.0kb upstream 2670 true Scaffold3467: 182383-185052 Capsella grandiflora
Cagra.3467s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold3467: 182383-183382 Capsella grandiflora
Cagra.3467s0057 1.0kb downstream 1.0kb downstream 2635 true Scaffold3467: 183383-186017 Capsella grandiflora
Cagra.3467s0057 1.0kb downstream 1.0kb downstream 965 false Scaffold3467: 185053-186017 Capsella grandiflora
Cagra.3467s0057 2.0kb upstream 2.0kb upstream 3670 true Scaffold3467: 181383-185052 Capsella grandiflora
Cagra.3467s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold3467: 181383-183382 Capsella grandiflora
Cagra.3467s0057 2.0kb downstream 2.0kb downstream 2635 true Scaffold3467: 183383-186017 Capsella grandiflora
Cagra.3467s0057 2.0kb downstream 2.0kb downstream 965 false Scaffold3467: 185053-186017 Capsella grandiflora
Cagra.3467s0057 5.0kb upstream 5.0kb upstream 6670 true Scaffold3467: 178383-185052 Capsella grandiflora
Cagra.3467s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold3467: 178383-183382 Capsella grandiflora
Cagra.3467s0057 5.0kb downstream 5.0kb downstream 2635 true Scaffold3467: 183383-186017 Capsella grandiflora
Cagra.3467s0057 5.0kb downstream 5.0kb downstream 965 false Scaffold3467: 185053-186017 Capsella grandiflora
Cagra.3467s0057 10.0kb upstream 10.0kb upstream 11670 true Scaffold3467: 173383-185052 Capsella grandiflora
Cagra.3467s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold3467: 173383-183382 Capsella grandiflora
Cagra.3467s0057 10.0kb downstream 10.0kb downstream 2635 true Scaffold3467: 183383-186017 Capsella grandiflora
Cagra.3467s0057 10.0kb downstream 10.0kb downstream 965 false Scaffold3467: 185053-186017 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366687 5261 Brassicaceae View MSA
123836866 5264 Brassicales-Malvales View MSA
124342806 5266 SBM View MSA
124246746 5268 Malvidae View MSA
124069337 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain