Gene : Cagra.3501s0027 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  27
Name:  ? Cagra.3501s0027 Secondary Identifier:  ? PAC:28902280
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0027 0.5kb upstream 0.5kb upstream 2435 true Scaffold3501: 98361-100795 Capsella grandiflora
Cagra.3501s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 100296-100795 Capsella grandiflora
Cagra.3501s0027 0.5kb downstream 0.5kb downstream 2435 true Scaffold3501: 97861-100295 Capsella grandiflora
Cagra.3501s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 97861-98360 Capsella grandiflora
Cagra.3501s0027 1.0kb upstream 1.0kb upstream 2935 true Scaffold3501: 98361-101295 Capsella grandiflora
Cagra.3501s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 100296-101295 Capsella grandiflora
Cagra.3501s0027 1.0kb downstream 1.0kb downstream 2935 true Scaffold3501: 97361-100295 Capsella grandiflora
Cagra.3501s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 97361-98360 Capsella grandiflora
Cagra.3501s0027 2.0kb upstream 2.0kb upstream 3935 true Scaffold3501: 98361-102295 Capsella grandiflora
Cagra.3501s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 100296-102295 Capsella grandiflora
Cagra.3501s0027 2.0kb downstream 2.0kb downstream 3935 true Scaffold3501: 96361-100295 Capsella grandiflora
Cagra.3501s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 96361-98360 Capsella grandiflora
Cagra.3501s0027 5.0kb upstream 5.0kb upstream 6935 true Scaffold3501: 98361-105295 Capsella grandiflora
Cagra.3501s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 100296-105295 Capsella grandiflora
Cagra.3501s0027 5.0kb downstream 5.0kb downstream 6935 true Scaffold3501: 93361-100295 Capsella grandiflora
Cagra.3501s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 93361-98360 Capsella grandiflora
Cagra.3501s0027 10.0kb upstream 10.0kb upstream 11935 true Scaffold3501: 98361-110295 Capsella grandiflora
Cagra.3501s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 100296-110295 Capsella grandiflora
Cagra.3501s0027 10.0kb downstream 10.0kb downstream 11935 true Scaffold3501: 88361-100295 Capsella grandiflora
Cagra.3501s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 88361-98360 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362488 5261 Brassicaceae View MSA
123835354 5264 Brassicales-Malvales View MSA
124322033 5266 SBM View MSA
124250736 5268 Malvidae View MSA
124073198 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain