Gene : Cagra.3501s0036 C. grandiflora v1.1
Defline:  (1 of 244) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  36
Name:  ? Cagra.3501s0036 Secondary Identifier:  ? PAC:28902382
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0036 0.5kb upstream 0.5kb upstream 3004 true Scaffold3501: 142883-145886 Capsella grandiflora
Cagra.3501s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 142883-143382 Capsella grandiflora
Cagra.3501s0036 0.5kb downstream 0.5kb downstream 3004 true Scaffold3501: 143383-146386 Capsella grandiflora
Cagra.3501s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 145887-146386 Capsella grandiflora
Cagra.3501s0036 1.0kb upstream 1.0kb upstream 3504 true Scaffold3501: 142383-145886 Capsella grandiflora
Cagra.3501s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 142383-143382 Capsella grandiflora
Cagra.3501s0036 1.0kb downstream 1.0kb downstream 3504 true Scaffold3501: 143383-146886 Capsella grandiflora
Cagra.3501s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 145887-146886 Capsella grandiflora
Cagra.3501s0036 2.0kb upstream 2.0kb upstream 4504 true Scaffold3501: 141383-145886 Capsella grandiflora
Cagra.3501s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 141383-143382 Capsella grandiflora
Cagra.3501s0036 2.0kb downstream 2.0kb downstream 4504 true Scaffold3501: 143383-147886 Capsella grandiflora
Cagra.3501s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 145887-147886 Capsella grandiflora
Cagra.3501s0036 5.0kb upstream 5.0kb upstream 7504 true Scaffold3501: 138383-145886 Capsella grandiflora
Cagra.3501s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 138383-143382 Capsella grandiflora
Cagra.3501s0036 5.0kb downstream 5.0kb downstream 7504 true Scaffold3501: 143383-150886 Capsella grandiflora
Cagra.3501s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 145887-150886 Capsella grandiflora
Cagra.3501s0036 10.0kb upstream 10.0kb upstream 12504 true Scaffold3501: 133383-145886 Capsella grandiflora
Cagra.3501s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 133383-143382 Capsella grandiflora
Cagra.3501s0036 10.0kb downstream 10.0kb downstream 12504 true Scaffold3501: 143383-155886 Capsella grandiflora
Cagra.3501s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 145887-155886 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371324 5261 Brassicaceae View MSA
123836664 5264 Brassicales-Malvales View MSA
124340702 5266 SBM View MSA
124253575 5268 Malvidae View MSA
124060978 5270 Rosid View MSA
123741076 5271 Pentapetalae View MSA
122786052 5272 Eudicot View MSA
122049686 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain