Gene : Cagra.3402s0004 C. grandiflora v1.1
Genomic Order:  4 Name:  ? Cagra.3402s0004
Secondary Identifier:  ? PAC:28900511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3402s0004 0.5kb upstream 0.5kb upstream 1319 true Scaffold3402: 19335-20653 Capsella grandiflora
Cagra.3402s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3402: 19335-19834 Capsella grandiflora
Cagra.3402s0004 0.5kb downstream 0.5kb downstream 912 true Scaffold3402: 19835-20746 Capsella grandiflora
Cagra.3402s0004 0.5kb downstream 0.5kb downstream 93 false Scaffold3402: 20654-20746 Capsella grandiflora
Cagra.3402s0004 1.0kb upstream 1.0kb upstream 1819 true Scaffold3402: 18835-20653 Capsella grandiflora
Cagra.3402s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3402: 18835-19834 Capsella grandiflora
Cagra.3402s0004 1.0kb downstream 1.0kb downstream 912 true Scaffold3402: 19835-20746 Capsella grandiflora
Cagra.3402s0004 1.0kb downstream 1.0kb downstream 93 false Scaffold3402: 20654-20746 Capsella grandiflora
Cagra.3402s0004 2.0kb upstream 2.0kb upstream 2819 true Scaffold3402: 17835-20653 Capsella grandiflora
Cagra.3402s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3402: 17835-19834 Capsella grandiflora
Cagra.3402s0004 2.0kb downstream 2.0kb downstream 912 true Scaffold3402: 19835-20746 Capsella grandiflora
Cagra.3402s0004 2.0kb downstream 2.0kb downstream 93 false Scaffold3402: 20654-20746 Capsella grandiflora
Cagra.3402s0004 5.0kb upstream 5.0kb upstream 5819 true Scaffold3402: 14835-20653 Capsella grandiflora
Cagra.3402s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3402: 14835-19834 Capsella grandiflora
Cagra.3402s0004 5.0kb downstream 5.0kb downstream 912 true Scaffold3402: 19835-20746 Capsella grandiflora
Cagra.3402s0004 5.0kb downstream 5.0kb downstream 93 false Scaffold3402: 20654-20746 Capsella grandiflora
Cagra.3402s0004 10.0kb upstream 10.0kb upstream 10819 true Scaffold3402: 9835-20653 Capsella grandiflora
Cagra.3402s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3402: 9835-19834 Capsella grandiflora
Cagra.3402s0004 10.0kb downstream 10.0kb downstream 912 true Scaffold3402: 19835-20746 Capsella grandiflora
Cagra.3402s0004 10.0kb downstream 10.0kb downstream 93 false Scaffold3402: 20654-20746 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343950 5261 Brassicaceae View MSA
123784028 5264 Brassicales-Malvales View MSA
124282229 5266 SBM View MSA
124136867 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain