Gene : Cagra.4153s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23327:SF9 - ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN Genomic Order:  15
Name:  ? Cagra.4153s0015 Secondary Identifier:  ? PAC:28908548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4153s0015 0.5kb upstream 0.5kb upstream 5271 true Scaffold4153: 58585-63855 Capsella grandiflora
Cagra.4153s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold4153: 63356-63855 Capsella grandiflora
Cagra.4153s0015 0.5kb downstream 0.5kb downstream 5271 true Scaffold4153: 58085-63355 Capsella grandiflora
Cagra.4153s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold4153: 58085-58584 Capsella grandiflora
Cagra.4153s0015 1.0kb upstream 1.0kb upstream 5771 true Scaffold4153: 58585-64355 Capsella grandiflora
Cagra.4153s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold4153: 63356-64355 Capsella grandiflora
Cagra.4153s0015 1.0kb downstream 1.0kb downstream 5771 true Scaffold4153: 57585-63355 Capsella grandiflora
Cagra.4153s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold4153: 57585-58584 Capsella grandiflora
Cagra.4153s0015 2.0kb upstream 2.0kb upstream 6771 true Scaffold4153: 58585-65355 Capsella grandiflora
Cagra.4153s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold4153: 63356-65355 Capsella grandiflora
Cagra.4153s0015 2.0kb downstream 2.0kb downstream 6771 true Scaffold4153: 56585-63355 Capsella grandiflora
Cagra.4153s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold4153: 56585-58584 Capsella grandiflora
Cagra.4153s0015 5.0kb upstream 5.0kb upstream 9771 true Scaffold4153: 58585-68355 Capsella grandiflora
Cagra.4153s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold4153: 63356-68355 Capsella grandiflora
Cagra.4153s0015 5.0kb downstream 5.0kb downstream 9771 true Scaffold4153: 53585-63355 Capsella grandiflora
Cagra.4153s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold4153: 53585-58584 Capsella grandiflora
Cagra.4153s0015 10.0kb upstream 10.0kb upstream 14771 true Scaffold4153: 58585-73355 Capsella grandiflora
Cagra.4153s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold4153: 63356-73355 Capsella grandiflora
Cagra.4153s0015 10.0kb downstream 10.0kb downstream 14771 true Scaffold4153: 48585-63355 Capsella grandiflora
Cagra.4153s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold4153: 48585-58584 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375549 5261 Brassicaceae View MSA
123840530 5264 Brassicales-Malvales View MSA
124345117 5266 SBM View MSA
124241219 5268 Malvidae View MSA
124060590 5270 Rosid View MSA
123742205 5271 Pentapetalae View MSA
122791083 5272 Eudicot View MSA
122048007 5273 Angiosperm View MSA
121347127 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain