Gene : Cagra.4095s0004 C. grandiflora v1.1
Defline:  (1 of 4) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  4
Name:  ? Cagra.4095s0004 Secondary Identifier:  ? PAC:28908330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4095s0004 0.5kb upstream 0.5kb upstream 2984 true Scaffold4095: 8645-11628 Capsella grandiflora
Cagra.4095s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4095: 11129-11628 Capsella grandiflora
Cagra.4095s0004 0.5kb downstream 0.5kb downstream 2984 true Scaffold4095: 8145-11128 Capsella grandiflora
Cagra.4095s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4095: 8145-8644 Capsella grandiflora
Cagra.4095s0004 1.0kb upstream 1.0kb upstream 3484 true Scaffold4095: 8645-12128 Capsella grandiflora
Cagra.4095s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4095: 11129-12128 Capsella grandiflora
Cagra.4095s0004 1.0kb downstream 1.0kb downstream 3484 true Scaffold4095: 7645-11128 Capsella grandiflora
Cagra.4095s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4095: 7645-8644 Capsella grandiflora
Cagra.4095s0004 2.0kb upstream 2.0kb upstream 4484 true Scaffold4095: 8645-13128 Capsella grandiflora
Cagra.4095s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4095: 11129-13128 Capsella grandiflora
Cagra.4095s0004 2.0kb downstream 2.0kb downstream 4484 true Scaffold4095: 6645-11128 Capsella grandiflora
Cagra.4095s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4095: 6645-8644 Capsella grandiflora
Cagra.4095s0004 5.0kb upstream 5.0kb upstream 7484 true Scaffold4095: 8645-16128 Capsella grandiflora
Cagra.4095s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4095: 11129-16128 Capsella grandiflora
Cagra.4095s0004 5.0kb downstream 5.0kb downstream 7484 true Scaffold4095: 3645-11128 Capsella grandiflora
Cagra.4095s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4095: 3645-8644 Capsella grandiflora
Cagra.4095s0004 10.0kb upstream 10.0kb upstream 7518 true Scaffold4095: 8645-16162 Capsella grandiflora
Cagra.4095s0004 10.0kb upstream 10.0kb upstream 5034 false Scaffold4095: 11129-16162 Capsella grandiflora
Cagra.4095s0004 10.0kb downstream 10.0kb downstream 11128 true Scaffold4095: 1-11128 Capsella grandiflora
Cagra.4095s0004 10.0kb downstream 10.0kb downstream 8644 false Scaffold4095: 1-8644 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370637 5261 Brassicaceae View MSA
123800008 5264 Brassicales-Malvales View MSA
124297470 5266 SBM View MSA
124149353 5268 Malvidae View MSA
123875174 5270 Rosid View MSA
123459041 5271 Pentapetalae View MSA
122494437 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain