Gene : Cagra.4031s0053 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  53
Name:  ? Cagra.4031s0053 Secondary Identifier:  ? PAC:28904333
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4031s0053 0.5kb upstream 0.5kb upstream 2552 true Scaffold4031: 168418-170969 Capsella grandiflora
Cagra.4031s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold4031: 170470-170969 Capsella grandiflora
Cagra.4031s0053 0.5kb downstream 0.5kb downstream 2552 true Scaffold4031: 167918-170469 Capsella grandiflora
Cagra.4031s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold4031: 167918-168417 Capsella grandiflora
Cagra.4031s0053 1.0kb upstream 1.0kb upstream 3052 true Scaffold4031: 168418-171469 Capsella grandiflora
Cagra.4031s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold4031: 170470-171469 Capsella grandiflora
Cagra.4031s0053 1.0kb downstream 1.0kb downstream 3052 true Scaffold4031: 167418-170469 Capsella grandiflora
Cagra.4031s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold4031: 167418-168417 Capsella grandiflora
Cagra.4031s0053 2.0kb upstream 2.0kb upstream 4052 true Scaffold4031: 168418-172469 Capsella grandiflora
Cagra.4031s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold4031: 170470-172469 Capsella grandiflora
Cagra.4031s0053 2.0kb downstream 2.0kb downstream 4052 true Scaffold4031: 166418-170469 Capsella grandiflora
Cagra.4031s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold4031: 166418-168417 Capsella grandiflora
Cagra.4031s0053 5.0kb upstream 5.0kb upstream 7052 true Scaffold4031: 168418-175469 Capsella grandiflora
Cagra.4031s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold4031: 170470-175469 Capsella grandiflora
Cagra.4031s0053 5.0kb downstream 5.0kb downstream 7052 true Scaffold4031: 163418-170469 Capsella grandiflora
Cagra.4031s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold4031: 163418-168417 Capsella grandiflora
Cagra.4031s0053 10.0kb upstream 10.0kb upstream 12052 true Scaffold4031: 168418-180469 Capsella grandiflora
Cagra.4031s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold4031: 170470-180469 Capsella grandiflora
Cagra.4031s0053 10.0kb downstream 10.0kb downstream 12052 true Scaffold4031: 158418-170469 Capsella grandiflora
Cagra.4031s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold4031: 158418-168417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371297 5261 Brassicaceae View MSA
123831836 5264 Brassicales-Malvales View MSA
124345972 5266 SBM View MSA
124242444 5268 Malvidae View MSA
124060677 5270 Rosid View MSA
123746655 5271 Pentapetalae View MSA
122793179 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain