Gene : Cagra.4044s0005 C. grandiflora v1.1
Defline:  (1 of 1) 3.1.3.2//3.1.3.41//3.1.3.60 - Acid phosphatase / Phosphomonoesterase // Genomic Order:  5
Name:  ? Cagra.4044s0005 Secondary Identifier:  ? PAC:28905194
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  
Cgrandiflora PWY-6348 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4044s0005 0.5kb upstream 0.5kb upstream 3293 true Scaffold4044: 30629-33921 Capsella grandiflora
Cagra.4044s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4044: 33422-33921 Capsella grandiflora
Cagra.4044s0005 0.5kb downstream 0.5kb downstream 3293 true Scaffold4044: 30129-33421 Capsella grandiflora
Cagra.4044s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4044: 30129-30628 Capsella grandiflora
Cagra.4044s0005 1.0kb upstream 1.0kb upstream 3793 true Scaffold4044: 30629-34421 Capsella grandiflora
Cagra.4044s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4044: 33422-34421 Capsella grandiflora
Cagra.4044s0005 1.0kb downstream 1.0kb downstream 3793 true Scaffold4044: 29629-33421 Capsella grandiflora
Cagra.4044s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4044: 29629-30628 Capsella grandiflora
Cagra.4044s0005 2.0kb upstream 2.0kb upstream 4793 true Scaffold4044: 30629-35421 Capsella grandiflora
Cagra.4044s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4044: 33422-35421 Capsella grandiflora
Cagra.4044s0005 2.0kb downstream 2.0kb downstream 4793 true Scaffold4044: 28629-33421 Capsella grandiflora
Cagra.4044s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4044: 28629-30628 Capsella grandiflora
Cagra.4044s0005 5.0kb upstream 5.0kb upstream 6454 true Scaffold4044: 30629-37082 Capsella grandiflora
Cagra.4044s0005 5.0kb upstream 5.0kb upstream 3661 false Scaffold4044: 33422-37082 Capsella grandiflora
Cagra.4044s0005 5.0kb downstream 5.0kb downstream 7793 true Scaffold4044: 25629-33421 Capsella grandiflora
Cagra.4044s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4044: 25629-30628 Capsella grandiflora
Cagra.4044s0005 10.0kb upstream 10.0kb upstream 6454 true Scaffold4044: 30629-37082 Capsella grandiflora
Cagra.4044s0005 10.0kb upstream 10.0kb upstream 3661 false Scaffold4044: 33422-37082 Capsella grandiflora
Cagra.4044s0005 10.0kb downstream 10.0kb downstream 12793 true Scaffold4044: 20629-33421 Capsella grandiflora
Cagra.4044s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4044: 20629-30628 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343589 5261 Brassicaceae View MSA
123830800 5264 Brassicales-Malvales View MSA
124321694 5266 SBM View MSA
124244832 5268 Malvidae View MSA
124073856 5270 Rosid View MSA
123747428 5271 Pentapetalae View MSA
122789658 5272 Eudicot View MSA
122041724 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain